| New model in OGS2.0 | DPOGS210102 |
|---|---|
| Genomic Position | scaffold430:+ 435511-441069 |
| See gene structure | |
| CDS Length | 735 |
| Paired RNAseq reads | 5096 |
| Single RNAseq reads | 18502 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002788 (1e-10) |
| Best Drosophila hit | limpet, isoform I (7e-106) |
| Best Human hit | four and a half LIM domains protein 3 (3e-55) |
| Best NR hit (blastp) | AGAP005400-PB [Anopheles gambiae str. PEST] (1e-109) |
| Best NR hit (blastx) | AGAP005400-PB [Anopheles gambiae str. PEST] (9e-116) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0031430 M band GO:0019904 protein domain specific binding GO:0005515 protein binding |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | MCL10263 |
Nucleotide sequence:
ATGTCAGCGGATGTGTTGAGTGATGATTTCAAATCCCGTCTTCATTTGACGACGAAGACT
GTTGGACAGGAGAGGATAAGGCGAGCGCTTGAGAACAACGAGGATGTGGCGATACTGTCC
ATGTTCCTACCGAATGCAACAGCTGAGAGGGAGAATAAAAAATTCTGTTGTGTCATGAAA
GACCAATGCCTGCTCGGGGATCCCAAAAAAACTATCGCAGGCACCAAGAAGATGGAGTAC
AAGACTCGACAGTGGCATGAGAAGTGTTTCTGCTGCGTGGTGTGCAAGAAAGCCATTGGG
ACCAAGAGCTTCATCCCTCGGGAACAGGAGATCTACTGCACTGGTTGTTACGAGAATAAG
TTCTCTACGCGCTGCGTCAAATGCAATAAGATTATAACGCAAGACGGCGTGACGTACAAG
CACGAGCCCTGGCACCGCGAGTGCTTCACCTGCACACACTGCAACAACTCGCTGGCCGGG
GAGCGCTTCACCTCCAGAGACGAGAAGCCATACTGCAGCGAATGTTTCGGGGAACTGTTC
GCCAAGAGATGCACCGCATGCAGCAAGCCCATCACCGGTATCGGTGGCACGCGTTTCATC
TCGTTCGAGGATCGTCATTGGCACAACAACTGCTTCCAGTGCGCTTACTGCAAGGTGTCT
CTCGTCGGGAAGGGATTCATCACTGTGGAACAGGACGTCATTTGCCCCGAGTGCGCCAAG
CAGAAGATCGTGTAA
Protein sequence:
MSADVLSDDFKSRLHLTTKTVGQERIRRALENNEDVAILSMFLPNATAERENKKFCCVMK
DQCLLGDPKKTIAGTKKMEYKTRQWHEKCFCCVVCKKAIGTKSFIPREQEIYCTGCYENK
FSTRCVKCNKIITQDGVTYKHEPWHRECFTCTHCNNSLAGERFTSRDEKPYCSECFGELF
AKRCTACSKPITGIGGTRFISFEDRHWHNNCFQCAYCKVSLVGKGFITVEQDVICPECAK
QKIV