Genomic Position | scaffold10109:+ 176-1991 |
---|---|
See gene structure | |
CDS Length | 1086 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 11 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (7e-51) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (2e-48) |
GeneOntology terms    | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10014 |
Nucleotide sequence:
ATGGTCAGTTTCGATATACAGTCATTATTCACTAGTCTACCTGTTCTTGACTGCATCGAG
ATTGTAAGAGGTAAGTTAAAGGATAACAATATGCCTATTGAATATGCAGACCTTTTAAAG
CATTGCCTAACATCTGGCTACCTCATCTGGAAGGATGAATTCTACATACAAGTAGATGGA
GTTGCAATAGGTTCACCGGTCTCCCCCGTTGTCGCTGATATATTCATGGAGGACTTCGAG
GCGCTAGCCCTTTGCTCTTCTCCAATAAAACCTTTAATATATAAACGGAAACCCACACAT
ACGGATAGGTATCTTAATGGAAACTCACACCACCATCCTATCCAGCTAGCTACCGTTGGC
AAATCTTTGTTAAAGAGAGCCCAACACCTTTGTGATGCTGAACAACTAGAGACCGAGCTG
CGGCATGTAAAACATGCTCTCACCACCAACAACCTGCCCGTGCCTCGCCAGCATCGCAAG
AACCACTTGAAGCCACCCATAGTTGAGCTACAATCTGCAATATTACCATATGTGAAGGGA
GTTAGAATAGGCAACATGTTGAAGAAGCTTTCGATCAAGACTATTTACAAACTATATAAG
AAAGTGAGCCAATTCTTGAGACCAATCAAGAGTACCATTCCTTTGCAACAAGCGCTCGTA
TACAAACTGGATTATTGGCGATACATCGAGGTGCTGAGAAGACTATATGACACCGCCACC
GTCCAGCTCCAGGACCATAAGATCAACCCCATCGAGCTGCGTCGGGGGGTGAGACAGGGG
GATGTTATATCGCCGAAGGTATTCACCAACGCACTTGAAGATGTCTTTAAGACTGTGGAC
TGGACTGGACGGGGTATAAACGTGAACGGTGAGCACATCTCGCACCTTCGGTTTGCCCAC
AACATCGTTATAGTAGCAGAGTCGCTGGAACAGTTAAGTGGGATGCTTTACCTTAATGAA
GCCTCACGACGGGTCGGTCTAGGCATGAACCTGGATAAAACCAAAGTGATGTTCAATGAA
CATGTTTTGCCAAGTCCGATATATGTCGAAGGATCGATGCTTGAAGTAGTTCAGGAGTAT
ATCTAG
Protein sequence:
MVSFDIQSLFTSLPVLDCIEIVRGKLKDNNMPIEYADLLKHCLTSGYLIWKDEFYIQVDG
VAIGSPVSPVVADIFMEDFEALALCSSPIKPLIYKRKPTHTDRYLNGNSHHHPIQLATVG
KSLLKRAQHLCDAEQLETELRHVKHALTTNNLPVPRQHRKNHLKPPIVELQSAILPYVKG
VRIGNMLKKLSIKTIYKLYKKVSQFLRPIKSTIPLQQALVYKLDYWRYIEVLRRLYDTAT
VQLQDHKINPIELRRGVRQGDVISPKVFTNALEDVFKTVDWTGRGINVNGEHISHLRFAH
NIVIVAESLEQLSGMLYLNEASRRVGLGMNLDKTKVMFNEHVLPSPIYVEGSMLEVVQEY
I