| Genomic Position | scaffold10109:+ 176-1991 |
|---|---|
| See gene structure | |
| CDS Length | 1086 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 11 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (7e-51) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (2e-48) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGTCAGTTTCGATATACAGTCATTATTCACTAGTCTACCTGTTCTTGACTGCATCGAG
ATTGTAAGAGGTAAGTTAAAGGATAACAATATGCCTATTGAATATGCAGACCTTTTAAAG
CATTGCCTAACATCTGGCTACCTCATCTGGAAGGATGAATTCTACATACAAGTAGATGGA
GTTGCAATAGGTTCACCGGTCTCCCCCGTTGTCGCTGATATATTCATGGAGGACTTCGAG
GCGCTAGCCCTTTGCTCTTCTCCAATAAAACCTTTAATATATAAACGGAAACCCACACAT
ACGGATAGGTATCTTAATGGAAACTCACACCACCATCCTATCCAGCTAGCTACCGTTGGC
AAATCTTTGTTAAAGAGAGCCCAACACCTTTGTGATGCTGAACAACTAGAGACCGAGCTG
CGGCATGTAAAACATGCTCTCACCACCAACAACCTGCCCGTGCCTCGCCAGCATCGCAAG
AACCACTTGAAGCCACCCATAGTTGAGCTACAATCTGCAATATTACCATATGTGAAGGGA
GTTAGAATAGGCAACATGTTGAAGAAGCTTTCGATCAAGACTATTTACAAACTATATAAG
AAAGTGAGCCAATTCTTGAGACCAATCAAGAGTACCATTCCTTTGCAACAAGCGCTCGTA
TACAAACTGGATTATTGGCGATACATCGAGGTGCTGAGAAGACTATATGACACCGCCACC
GTCCAGCTCCAGGACCATAAGATCAACCCCATCGAGCTGCGTCGGGGGGTGAGACAGGGG
GATGTTATATCGCCGAAGGTATTCACCAACGCACTTGAAGATGTCTTTAAGACTGTGGAC
TGGACTGGACGGGGTATAAACGTGAACGGTGAGCACATCTCGCACCTTCGGTTTGCCCAC
AACATCGTTATAGTAGCAGAGTCGCTGGAACAGTTAAGTGGGATGCTTTACCTTAATGAA
GCCTCACGACGGGTCGGTCTAGGCATGAACCTGGATAAAACCAAAGTGATGTTCAATGAA
CATGTTTTGCCAAGTCCGATATATGTCGAAGGATCGATGCTTGAAGTAGTTCAGGAGTAT
ATCTAG
Protein sequence:
MVSFDIQSLFTSLPVLDCIEIVRGKLKDNNMPIEYADLLKHCLTSGYLIWKDEFYIQVDG
VAIGSPVSPVVADIFMEDFEALALCSSPIKPLIYKRKPTHTDRYLNGNSHHHPIQLATVG
KSLLKRAQHLCDAEQLETELRHVKHALTTNNLPVPRQHRKNHLKPPIVELQSAILPYVKG
VRIGNMLKKLSIKTIYKLYKKVSQFLRPIKSTIPLQQALVYKLDYWRYIEVLRRLYDTAT
VQLQDHKINPIELRRGVRQGDVISPKVFTNALEDVFKTVDWTGRGINVNGEHISHLRFAH
NIVIVAESLEQLSGMLYLNEASRRVGLGMNLDKTKVMFNEHVLPSPIYVEGSMLEVVQEY
I