| New model in OGS2.0 | DPOGS204279 |
|---|---|
| Genomic Position | scaffold645:+ 52258-57633 |
| See gene structure | |
| CDS Length | 1974 |
| Paired RNAseq reads | 469 |
| Single RNAseq reads | 1129 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007555 (0.0) |
| Best Drosophila hit | CG5924 (9e-117) |
| Best Human hit | twinkle protein, mitochondrial isoform A (2e-105) |
| Best NR hit (blastp) | PREDICTED: similar to pom1 [Nasonia vitripennis] (2e-158) |
| Best NR hit (blastx) | PREDICTED: similar to pom1 [Nasonia vitripennis] (1e-148) |
| GeneOntology terms | GO:0003697 single-stranded DNA binding GO:0006264 mitochondrial DNA replication GO:0042645 mitochondrial nucleoid GO:0043139 5'-3' DNA helicase activity |
| InterPro families | IPR007694 DNA helicase, DnaB-like, C-terminal IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL13992 |
Nucleotide sequence:
ATGTATCATATTTTTCGAATAAATAAGTTACGTAGATATAAGAGATTAATATATTTAATA
AGTGATGTCAAAGATATACATAATATAGGTTTAAATGATATTCCTAAAGTTGAAGTAGCC
GATATTCGAAAGTTATTAAGGCAAAAAGGATTTGCAGTTCAGGATGGATTTACATCGATT
ACCACCAAATGTATTATATGTTCAGAAGAAAAAATTGAATCCAAGAAAAATGAATCCAAG
CTCTACGTTAATAAAACAACAGGTTACTTTTTATGTCCAAAATGTAATAATCACGGGCAC
TGGAGCATTCTTGAGCGGCTCGTAAAAAAGTCAAAAATTGAAGGGTCCATAAAAGACCAC
ATAGAAACTACGCAACAGAAACTAGAAGCTTTTAATAAAGACTGGCAATCTATTTCCAAT
GAAACTACCTCATTAATAGATTTAAATGAAGCAGATACAATAAATTTATTCCGTTTATTT
GAATTTCCTCATCATCCAGATGCCACAAAAGTATTATCCGAAGTAAGAGTGACTACGGAT
CACACAATATTATATTTCCCATTAAAAAACTCACTTGAAAATATAGTGGGCTATCGTAAA
ATACAGGCTGGGAGGGAAGATGAGGTTGAAAATGTAGGTTTACATATGGCTGGTCTTTTT
CATTGTAGAGCACCAAAAGTCACTCGTACAGATCAGGCAATACTTGTACCTACTGTACAA
GATGTTTTACATTTGTCCGCCAGTAAAGTACCGGGTACATTAATTTGGCTCACTAACTGC
AGCTTGCCGCCAGTATTACTGCCTTGCCTTGAACATTATCAAAAGCTCTGTCTGTGGGGT
GATTGGGACAACATGAGATCGGTTGCTGAAAAGCTGGGAGAGGAAAGGTGTCGTTTTGTA
AGGCCAACAGACGGTTTAGTGACAGCAACTGAGGCAGCAAATGCAAATTTATCTTTGAAG
ACACTGATATCAGAGGCCAAACCTGCGACACACAGATCCATCACCACCTTCGCGTCCCTT
AGAGATGATGTGTATGCGGAACTTACAAACATTGAAAAGGTTCGCGGTGTAAAATGGCGT
CGTTTCCCCGCCCTGACGAAACTGCTGGGTGGCCACCGGCGTGGGGAGTTGACCGTCCTA
ACTGGACCCACCGGCTGCGGTAAGACCACGCTCTGCGCTGAGATGTCCCTCGATCTGGCA
CTACAGGGGGTGACAACCCTATGGGGTAGTTTCGAGATCCGCAACTCCCGGCTGGCCCGC
ACCATGCTCCAACAGTTCGCTGGACTGCCGCTGGAACAGAATCTACAGGACTTCCCAAAG
TTTGCGGACGATTTCCAGAAACTACCGATTTTCTATCTCGCTTTCCACGGACAACAGTCC
ATTAAGGTTGTGATGGAAGCGGTGGAGCACGCTCGTTACATGCACGACATATGTCACGTG
GTGATCGACAACGTACAGTTCATGTTAGGGCTCGGAGACGAGGATCGTTACTTGCGACAG
GACGCCGTCATCGCCGCTTTTCGGACCTTCGCCACCGCCAGGCACTGCCACGTCACGCTG
GTGATGCATCCGAGGAAGGAAAGAGATTCAGAGGATTTGTCAACGAGCTCAATATTTGGC
AGTGCCAAAGCATCCCAGGAGGCTGATAATGTTTTAATAATACAGGATAAAAGATTGACG
GCTGTCCGAGGGAAGAAATATCTGCAAGTGGCAAAGAATAGATACAGCGGTGACCTTGGG
ATTGTTCCTCTCGACTTCGACAAGGATGCTCTCAGTTATCAAGCTAAGAAGAAGTCGAAG
AGAGACGACACAGACAAGCTGCTAGACCAGTGCATCGAGGAGTTCACATTGGACAAAACG
GAGACGAAACCGAAGAATAATACAAGTAAATCAAATAAAAATCAAAAAAACAGAATCCAA
GATGACGCTGACAGCTTCTTAAGTGATATCCTGAACTTGAATAGAACGAGGTGA
Protein sequence:
MYHIFRINKLRRYKRLIYLISDVKDIHNIGLNDIPKVEVADIRKLLRQKGFAVQDGFTSI
TTKCIICSEEKIESKKNESKLYVNKTTGYFLCPKCNNHGHWSILERLVKKSKIEGSIKDH
IETTQQKLEAFNKDWQSISNETTSLIDLNEADTINLFRLFEFPHHPDATKVLSEVRVTTD
HTILYFPLKNSLENIVGYRKIQAGREDEVENVGLHMAGLFHCRAPKVTRTDQAILVPTVQ
DVLHLSASKVPGTLIWLTNCSLPPVLLPCLEHYQKLCLWGDWDNMRSVAEKLGEERCRFV
RPTDGLVTATEAANANLSLKTLISEAKPATHRSITTFASLRDDVYAELTNIEKVRGVKWR
RFPALTKLLGGHRRGELTVLTGPTGCGKTTLCAEMSLDLALQGVTTLWGSFEIRNSRLAR
TMLQQFAGLPLEQNLQDFPKFADDFQKLPIFYLAFHGQQSIKVVMEAVEHARYMHDICHV
VIDNVQFMLGLGDEDRYLRQDAVIAAFRTFATARHCHVTLVMHPRKERDSEDLSTSSIFG
SAKASQEADNVLIIQDKRLTAVRGKKYLQVAKNRYSGDLGIVPLDFDKDALSYQAKKKSK
RDDTDKLLDQCIEEFTLDKTETKPKNNTSKSNKNQKNRIQDDADSFLSDILNLNRTR