| New model in OGS2.0 | DPOGS200951 |
|---|---|
| Genomic Position | scaffold2020:+ 36403-42048 |
| See gene structure | |
| CDS Length | 1827 |
| Paired RNAseq reads | 4064 |
| Single RNAseq reads | 11294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010129 (0.0) |
| Best Drosophila hit | pixie, isoform B (0.0) |
| Best Human hit | ATP-binding cassette sub-family E member 1 (0.0) |
| Best NR hit (blastp) | ribonuclease L inhibitor homolog [Bombyx mori] (0.0) |
| Best NR hit (blastx) | ribonuclease L inhibitor homolog [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0008428 ribonuclease inhibitor activity GO:0016071 mRNA metabolic process GO:0005739 mitochondrion GO:0005737 cytoplasm GO:0005524 ATP binding GO:0040007 growth GO:0016887 ATPase activity GO:0051536 iron-sulfur cluster binding GO:0009055 electron carrier activity GO:0006412 translation GO:0016049 cell growth GO:0043524 negative regulation of neuron apoptosis GO:0006413 translational initiation GO:0043024 ribosomal small subunit binding GO:0005852 eukaryotic translation initiation factor 3 complex |
| InterPro families | IPR003439 ABC transporter-like IPR007209 RNase L inhibitor RLI, possible metal-binding domain IPR001450 4Fe-4S binding domain IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPR017871 ABC transporter, conserved site IPR003593 ATPase, AAA+ type, core IPR013283 ABC transporter, ABCE |
| Orthology group | MCL13246 |
Nucleotide sequence:
ATGTCTCGAAAGAAAGCTACTGAAGAGACAGACAAATTAACACGTATCGCAATCGTGAAC
GCTGATCGTTGTAAGCCTAAAAGATGTAGGCAAGAGTGCAAGAAAAGTTGCCCAGTGGTG
CGCATGGGTAAGCTTTGCATTGAAGTGACTCCCAATGATAAGATTGCCACGATTTCCGAA
GAGCTGTGTATTGGTTGTGGAATTTGTGTGAAGAAATGTCCATTTGATGCTATAACCATC
ATTAATATTCCATCTAACTTGGAAAAGCATACCACTCACCGTTACTCTAAAAACTCCTTC
AAACTTCATCGTTTGCCGATACCTCGACCTGGAGAGGTTCTGGGACTTGTTGGTCAGAAT
GGTATTGGCAAGTCCACTGCCTTGAAAATCCTCGCTGGCAAACAAAAACCAAACTTGGGA
AGATTTGCTGATCCTCCTGATTGGCAAGAGATTCTATCTCATTTCCGCGGGTCGGAGCTT
CAGAACTATTTTACTAAGATCCTTGAGGATGATTTGAAAGCTCTCATTAAACCTCAATAT
GTGGACCAAATTCCGAAGGCTGTGAAGGGAACGGTTGGACAGTTACTTGATAAGAAAGAT
GAAAGGAAAAATCAAGATGTCATCTGTCGTATGCTGGATCTATCTCATATACGCGATCGT
GAAATCGCTGCACTCTCCGGTGGGGAGCTACAGCGTTTCGCGTGCGCCATGGTCTGCATT
CAAAACGGTGATATATTCATGTTTGATGAGCCCTCTTCATACTTGGATGTCAAACAGCGT
CTGAACGCTGCAAGGACTATCAGGTCACTCATCGACCCCGATAAATTTATTATAGTTGTG
GAGCATGACTTGTCAGTACTGGATTATTTATCTGACTTTATTTGTTGTTTGTACGGTGTC
CCTGGTGCTTATGGTGTTGTCACTATGCCCTTCTCTGTTCGTGAAGGTATAAATATTTTC
CTTGATGGTTTTGTGCCAACTGAAAATATGAGATTTAGGACTGAATCACTTGTGTTCAAA
GTAGCTGAATCTGCAACTGAAGAAGAGATAAAAAGAATGAACCACTATGAATATCCTCAA
ATGAGCAAAAAGATGGGTGATTTTAGTCTATATGTAGAACAAGGAGAGTTCTCTGATTCA
GAAATCTTAGTACTGTTGGGTGAAAATGGTACAGGAAAAACTACATTCATCAGAATGTTA
GCTGGTAATTTGGAGCCCGATGAAGGTGCAAACCAACTGCCACAGCTACATATTAGTTAT
AAGCCACAGAAAATATCACCCAAGTCGCAGGGCATGGTTAGAAATCTTCTGCACGACAAG
ATAAGAGATGCATACACACATCCGCAGTTTATTACAGACGTAATGAAGCCAATGAAAATT
GAAGAGATTATGGACCAAGAAGTGCAGAATCTGTCTGGTGGTGAATTGCAGCGTGTAGCA
TTGGTGCTATGTCTCGGTAAACCGGCGGAGGTTTATCTCATCGATGAACCTTCAGCTTAT
TTAGATTCCGAACAACGTCTTGTTGCTGCCAAGGTTATAAAACGGTTCATTCTGCATGCC
AAACGTACCGGTTTTGTGGTAGAGCACGACTTCATAATGGCAACATATCTAGCGGACAGA
GTCATAGTATTTGAAGGAACACCCTCGTCTAACGCGACCGCCCACGCTCCGCAGTCACTA
TTAAACGGAATGAACAAATTTCTGGAACTGCTCGGTATTACATTCAGAAGAGATCCAAAT
AACTTCAGACCTAGGATCAATAAACATGCATCTGTGAAGGATATAGAACAGAAGAGGGCT
GGCCAGTATTTCTTCCTGGAAGACTAA
Protein sequence:
MSRKKATEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISE
ELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQN
GIGKSTALKILAGKQKPNLGRFADPPDWQEILSHFRGSELQNYFTKILEDDLKALIKPQY
VDQIPKAVKGTVGQLLDKKDERKNQDVICRMLDLSHIRDREIAALSGGELQRFACAMVCI
QNGDIFMFDEPSSYLDVKQRLNAARTIRSLIDPDKFIIVVEHDLSVLDYLSDFICCLYGV
PGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEEIKRMNHYEYPQ
MSKKMGDFSLYVEQGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGANQLPQLHISY
KPQKISPKSQGMVRNLLHDKIRDAYTHPQFITDVMKPMKIEEIMDQEVQNLSGGELQRVA
LVLCLGKPAEVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADR
VIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASVKDIEQKRA
GQYFFLED