| New model in OGS2.0 | DPOGS202477 |
|---|---|
| Genomic Position | scaffold386:+ 4947-6012 |
| See gene structure | |
| CDS Length | 954 |
| Paired RNAseq reads | 4856 |
| Single RNAseq reads | 13991 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006093 (6e-07) |
| Best Drosophila hit | KLHL18, isoform B (9e-17) |
| Best Human hit | influenza virus NS1A-binding protein (3e-18) |
| Best NR hit (blastp) | PREDICTED: similar to ns1 binding protein [Nasonia vitripennis] (1e-52) |
| Best NR hit (blastx) | PREDICTED: similar to ns1 binding protein [Nasonia vitripennis] (5e-32) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0005634 nucleus GO:0005515 protein binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR006652 Kelch repeat type 1 IPR015915 Kelch-type beta propeller |
| Orthology group | ND |
Nucleotide sequence:
ATGTCCGTGGGGCGGTGCGCTCTGGGGGCGGCGGCGCTGAAGGGGCGGCTCGTGGTGTGC
GGAGGTTACGACAGCGCTCGGGTGTTGCGCACGGCAGAGGCTTACGATCCGCTCTCCAAC
ACGTGGTCGGCGCTTCCGGACATGAAGAGAGCGCGCGCTCGGTTCCCAGCCGCCCGCCTC
GGGGACGCGCTCTACGTTTTCGGTGGCTCGGACGGACAGACGGAGCTGGACTCCGTCGAC
GTGTACGAGGAGCGGTCGGACGGTCCCGGAGGTGGCTGGAGGGCGGGCGTCCGTCTGCCG
GTCGCTAGGTCTCACGCGGCGGCGGCGGCAGACGAGGCCCGGGGTCAGCTGTGGGTGGTC
GGGGGTTGGGCTGGCGGTCGCTCCCTGCGGTCGGTGCTGAGGCTGTCGGCAGGCGAGTCG
TCCTGGTCCGAGGGTCCGCCACTGCGCTGCGGTCGCTCGCAGTGCGCCGGCGTGGTGTGG
GAGGACCAGCTGTGGGTGTTCGGAGGCTGCGACTCCTGGAACTGCGTGGCGTCCACCGAA
CGTCTCCCGCTGGGCGACGACGCGGTCTCCTGGCTGGAAGGCCCGGCTCTGCCCACGGCG
CGGCGGTCGATGGGGGCGGCCGTGTGGCGAGGCCGCGCCGTAGCCGCGGGCGGCAGCGCG
GGTTCGGCTTCTCTCCGGGACACGGCGTTCCTGGAGGGCGAGGCGGGTCAGGCTCGCTGG
CGGGCAGGTCCGTCTTTGCGCCGTCCTCGCGCGGCTCCCGCCCTGGCGGCTCTGGGGTCG
GCGCTGGTGGCGGCGGGTGGGTTCTCCGGGAAGCACTTCCTGGCGTGTGTGGAAGTCCTC
CACGAGCCGGACGGGGAGTGGACCATGCTGAGGGACTCTCGCGACGCGCCCGCCCCGCTC
ACACCACAAGTATGTCTCAGCGAGAGGTCGGACGTGTCTTCTCGTCCCGCCTGA
Protein sequence:
MSVGRCALGAAALKGRLVVCGGYDSARVLRTAEAYDPLSNTWSALPDMKRARARFPAARL
GDALYVFGGSDGQTELDSVDVYEERSDGPGGGWRAGVRLPVARSHAAAAADEARGQLWVV
GGWAGGRSLRSVLRLSAGESSWSEGPPLRCGRSQCAGVVWEDQLWVFGGCDSWNCVASTE
RLPLGDDAVSWLEGPALPTARRSMGAAVWRGRAVAAGGSAGSASLRDTAFLEGEAGQARW
RAGPSLRRPRAAPALAALGSALVAAGGFSGKHFLACVEVLHEPDGEWTMLRDSRDAPAPL
TPQVCLSERSDVSSRPA