| New model in OGS2.0 | DPOGS202480 |
|---|---|
| Genomic Position | scaffold386:+ 18907-29021 |
| See gene structure | |
| CDS Length | 2271 |
| Paired RNAseq reads | 558 |
| Single RNAseq reads | 1534 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013689 (2e-50) |
| Best Drosophila hit | CG7735 (7e-28) |
| Best Human hit | ADP-ribosylation factor-like protein 6 (4e-31) |
| Best NR hit (blastp) | spliceosome associated protein, putative [Pediculus humanus corporis] (1e-40) |
| Best NR hit (blastx) | ADP-ribosylation factor-like protein 6 [Saccoglossus kowalevskii] (4e-33) |
| GeneOntology terms | GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0005622 intracellular GO:0000166 nucleotide binding GO:0070121 Kupffer's vesicle development GO:0032402 melanosome transport GO:0007368 determination of left/right symmetry GO:0033339 pectoral fin development GO:0007601 visual perception GO:0042384 cilium assembly |
| InterPro families | IPR005828 General substrate transporter IPR006689 ARF/SAR superfamily IPR020846 Major facilitator superfamily IPR005829 Sugar transporter, conserved site IPR006687 Small GTPase SAR1-type IPR006688 ADP-ribosylation factor IPR016196 Major facilitator superfamily, general substrate transporter |
| Orthology group | MCL16496 |
Nucleotide sequence:
ATGATTGTTACAAACACTTTTAGTTTTAAGGGAGTGTGGTGCGCCTTCATCCAGATAGCC
GTGGTGGTACTGATCAATATACCGACCGTGTCGTTTGGTCTGGCCATGGGCTGGGTGTCA
TTGGTGAGCGGAGAGGCTCCAGCGGAAGAGGCGGAGGCCTCGGGGAGGGGAGCCGTCATT
GCTGCTGTCACCACTTTCGGAGCCTCCATGGCTGGCGTCCCTTTGAGCGCGCGGGCTTTG
CTCTACGGACGCAAGTTTGCTCTCATTGGTACTTCGGCTTGCTTCGCGCTGTGCTGGACT
CTAAAGCTGGCGAGTCTGTGGTGCGGCTCAGAATGGTCGGGTGTAGGTGCGGCTCTGGTG
GTGGTTGCGAGGATCGCGGCAGGTTTAGGTGGAGCCTCCGCCTGGGCCTTGGAGCCCCTA
CTAGCCAGGGAGATGTGCAGTTCACAGTACCGCGGCGCAGCGGTGTCTGCTCTGTCTCTG
GCGCATAACGTTGGAGTCCTCGCTATGTACCTCGCAGCGGACGCGGCCGTACCTCACAAG
ACAGTGCTGTATTGTTGCCTGTCACTGGCGTTAGTTCACTGCGTTGCGTTCACTTTCGTT
CCTGAATCACCGTCCTTCTTAGCCGCTAACGGAAAAATGGAGGAGGCTCGCCTGTCCCTC
GCTCGTCTTCGTGGTGTGTCTTCTGATCATCCAGAACTGATCCACGCATTTGCAGCCTTA
CCACCAACTGAAGAAGTGCGATCTCCGCTTCTACTTGCCAGACAAATGTTGAGTGATCGT
CAACGTCGCCGTGCTTTCATCATCGGTACAATAACAGTCATCGGACAAGAGGTCTGTGGC
GTGCTGGCCATCCTGCAGTACGCAGAGAGAATGTTCGTCATTGCGAGAGACGAAACTAGA
CTGACAGACTCGGTACCACCGACCACCCCACTGAAAACAGAAATTATGAACGATTCGAAA
TATTTAATATGGCCGACGACTAACGAAGTAATTGTAAAGAATTTGACAAGCAATTCTTCT
AATATTTCTGCTCCAGCATTATCCCCAACATTACATGATCTATCGGCCGGAGTTGTAACA
GACGAGTTGTTATCACCGGCTCGACACGCGGTGCTGCTGGGGACAGTGCAGCTCCTCACT
TCCGCCTTGTCGTTGTATCTAGTGGAGAGATTTGGACGGAGGCCGCTACTGCTGTGGTGT
TCCGTGGTGACGGGAGCGTGTCTGGTGCTGGCGGCACTGGTGACGGGGACGCGCGTGTCC
GTCGGGGGGCTCGTGGCGGCGGACGTGGCAGCCCTCGCCATCGCCGGGGCCGTCGCCGCG
GACTCCGCGGGTCTACAGCACGTGCCCTACGCCATATTATCTGAGATGTTCCATTATGAG
TATCGCGGCTGCGCTGTGATGCTCGCCATAGCTGGTGCGTGTGCGGGAAACGCCTTGGAG
GTGTTGTTGTTCCCGGGGGTGGTGGCTTTCGGGGGTCTGATGATGGCGCTCACACTGGCC
GCGGTTCTCACCTTCCTTTATACCGTGTTCGTGGCTCTGGCCGTTCCGGAGACGAAGGAC
AGGACGCCGGAACAGATATATGACGTCATCTGTCCTCGACACGAGGGGACTTGCAAAACA
ATTAAAAAAGTGTATAAAAATAAGAATTGTGGAACTAATAAGGAGACTATGTGTACTAAA
GTGAGTGATGTAGAACTGAGGAGATACCTCAAGTGCGATCAAGCAGATATCATTATCGCT
AGTGTGGAGATGGGTCTGTTGGAGAAGTTATCATCGTGGATGGGAGGCGGCGGGAAGGTA
GTGACAGTACTGGTGCTGGGACTCGACAACAGTGGCAAGAGTACTATGTTAAGGACGCTA
CGGACAGAGCAGGAGGGGCAGGGTCAGGGGGCAGGGCCGGCGAGCAGCGTACCTACTATA
GGACAACAACAGGAGAACTTCCAGAGCGGAGGTGTATCTTTCCGTGCGTGGGACGTGTCG
GGCGCGGCGCGGCTCCGGGCTCTCTGGGAGAGACACTACCGACACTCTGACGCTGTCATC
TTTGTGGTGGACTCCGCGGATCATCTGAGACTCGTGGTGGCGCGGTCTGAGTTGGAGCTG
ATGTTGTCTCACCCGGACATGGCGGGCCGCCGCCTGCCGTTTTTTACAACGCTGGGTCTG
GAGCGTATAACTGACAAGCCTTGGCACGTGTGCGAGAGCAGTGCTCTTAGCGGCGAGGGT
CTGGACGACGGAGTGTCCTGGCTGGCACGGCAACTTCGAGAGAAACACTGA
Protein sequence:
MIVTNTFSFKGVWCAFIQIAVVVLINIPTVSFGLAMGWVSLVSGEAPAEEAEASGRGAVI
AAVTTFGASMAGVPLSARALLYGRKFALIGTSACFALCWTLKLASLWCGSEWSGVGAALV
VVARIAAGLGGASAWALEPLLAREMCSSQYRGAAVSALSLAHNVGVLAMYLAADAAVPHK
TVLYCCLSLALVHCVAFTFVPESPSFLAANGKMEEARLSLARLRGVSSDHPELIHAFAAL
PPTEEVRSPLLLARQMLSDRQRRRAFIIGTITVIGQEVCGVLAILQYAERMFVIARDETR
LTDSVPPTTPLKTEIMNDSKYLIWPTTNEVIVKNLTSNSSNISAPALSPTLHDLSAGVVT
DELLSPARHAVLLGTVQLLTSALSLYLVERFGRRPLLLWCSVVTGACLVLAALVTGTRVS
VGGLVAADVAALAIAGAVAADSAGLQHVPYAILSEMFHYEYRGCAVMLAIAGACAGNALE
VLLFPGVVAFGGLMMALTLAAVLTFLYTVFVALAVPETKDRTPEQIYDVICPRHEGTCKT
IKKVYKNKNCGTNKETMCTKVSDVELRRYLKCDQADIIIASVEMGLLEKLSSWMGGGGKV
VTVLVLGLDNSGKSTMLRTLRTEQEGQGQGAGPASSVPTIGQQQENFQSGGVSFRAWDVS
GAARLRALWERHYRHSDAVIFVVDSADHLRLVVARSELELMLSHPDMAGRRLPFFTTLGL
ERITDKPWHVCESSALSGEGLDDGVSWLARQLREKH