| New model in OGS2.0 | DPOGS202108 |
|---|---|
| Genomic Position | scaffold495:- 78159-79484 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 283 |
| Single RNAseq reads | 736 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006899 (4e-72) |
| Best Drosophila hit | E2F transcription factor, isoform A (5e-21) |
| Best Human hit | transcription factor E2F4 (3e-48) |
| Best NR hit (blastp) | E2F transcription factor 4-like protein [Bombyx mori] (3e-76) |
| Best NR hit (blastx) | E2F transcription factor 4-like protein [Bombyx mori] (2e-76) |
| GeneOntology terms | GO:0008134 transcription factor binding GO:0005654 nucleoplasm GO:0005634 nucleus GO:0003677 DNA binding GO:0008361 regulation of cell size GO:0005515 protein binding GO:0007049 cell cycle GO:0008015 blood circulation GO:0019904 protein domain specific binding GO:0006884 cell volume homeostasis GO:0009887 organ morphogenesis GO:0002064 epithelial cell development GO:0006355 regulation of transcription, DNA-dependent GO:0005667 transcription factor complex GO:0042127 regulation of cell proliferation GO:0042384 cilium assembly GO:0003700 sequence-specific DNA binding transcription factor activity GO:0000083 regulation of transcription involved in G1/S phase of mitotic cell cycle |
| InterPro families | IPR003316 Transcription factor E2F/dimerisation partner (TDP) IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR015633 E2F Family |
| Orthology group | MCL17173 |
Nucleotide sequence:
ATGGCAGAGCTGTACTCTTATAAAAGGTATGAAAAATCACTTGGATTGCTTACAACGAGG
TTCGTGTCTTTACTTAAAAAAGCAAAGGATGGAGTTTTAGATTTAAAAATCGCAACTGAT
TTATTGGCAGTAAGACAAAAACGGCGAATTTATGATATAACTAACGTTCTAGAGGGAATT
GGTTTGATAGAAAAGCGAAGTAAGAATAGTATACAATGGAAGGGTGCCAGTCCAGATGGA
AATACATCAGAAATTGGTAAAAAAGTGACACTTCTAAGGAAACAAATAGGTCTTTTGGAG
GAACATGAAGAGTTATTAGACAAGCAAATGCACTGGATTGAGCAAAGTATAAAGAATGTC
ATAGATGATGCTGATAATGATGCTTTGTCTTATGTGACTCAAAATGATGTAAAAAACTGT
TTCCATGATAGTCAAGTGCTTGTATTGGAAGCACCACTTGGGGCCAATTTATCAGTTGGG
CAATTAGATGAGGGTGCAGGCGAAGATCAGTATTTTCTACATTTAAAATCAAATGAACCT
GTTGGTGTTATACTTTTGTGTGATGTTGAAAAGGATAAGATTGTAGATGACGATACTATG
GATGAGGAAGTAGAATGGTATGGGGATAGTGGGACTACAAATTCACAAGAATACCTTTTA
AGGCTAAGCCCGCCAGTAACAAAACAGGATTTCTCATTTTCTCTATATGGTACTGAAGGA
CTATGTGACTTATTTGATATTCCATATCCTAATCAATAG
Protein sequence:
MAELYSYKRYEKSLGLLTTRFVSLLKKAKDGVLDLKIATDLLAVRQKRRIYDITNVLEGI
GLIEKRSKNSIQWKGASPDGNTSEIGKKVTLLRKQIGLLEEHEELLDKQMHWIEQSIKNV
IDDADNDALSYVTQNDVKNCFHDSQVLVLEAPLGANLSVGQLDEGAGEDQYFLHLKSNEP
VGVILLCDVEKDKIVDDDTMDEEVEWYGDSGTTNSQEYLLRLSPPVTKQDFSFSLYGTEG
LCDLFDIPYPNQ