| New model in OGS2.0 | DPOGS202124 |
|---|---|
| Genomic Position | scaffold495:+ 154874-162513 |
| See gene structure | |
| CDS Length | 3570 |
| Paired RNAseq reads | 1093 |
| Single RNAseq reads | 2746 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006967 (0.0) |
| Best Drosophila hit | TBP-associated factor 2 (0.0) |
| Best Human hit | transcription initiation factor TFIID subunit 2 (0.0) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC011774 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011774 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0006367 transcription initiation from RNA polymerase II promoter GO:0005669 transcription factor TFIID complex GO:0016251 general RNA polymerase II transcription factor activity GO:0008270 zinc ion binding GO:0008237 metallopeptidase activity |
| InterPro families | IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal IPR016024 Armadillo-type fold |
| Orthology group | MCL12952 |
Nucleotide sequence:
ATGAAAAAAGAACGTACTGGCGACAATTGTCGCCCATTTAAATTAGCCCATCAAATTTTG
AGCTTAACAGGAATAAGCTTTGAAAGAAGAAGTGTGATAGGTTTTGTTGAGTTAACAATA
GTACCCCTAAAGGATAACTTAAGGTATATTCGCCTAAATGCCAAGCAATGTCGTATATAT
CGTGTGTGCCTAAACGACCAGTATGAAGCCAACTTTCAGTATTTTGATCCTTTCCTTGAT
ATTTGTCAAAGTGATGCCAACACGAGATCCCTCGAGGTGTTTTCTCAAAACCATTTATCA
GCTGCACAAAAGACAGATCCTGATCACAATTCTGGTGAACTCCACATACAAGTTCCAGAT
GATGCTGCCCACTTAGTCGGTGAAGGAAGGGGTTTGAGGATTGGCATTGAATTCTCTCTT
GAATCCCCACAGGGCGGGATGCACTTTGTGGTTCCAGAAGGAGAGGGAACTATGGTTGAG
AAATCAGCACATATGTTTACATACGGCCATTCAGCACGACTCTGGTTTCCTTGTGTGGAT
AGCTTTGCTGAACCTTGCACTTGGAAGCTTGAGTTTACTGTAGATGAGACATTCACAGCT
GTGTCTTGTGGGGAGTTATTAGATGTAGTGTACACACCTGATCATAGACGGAAGACATTC
CACTATGTTGTTAATACTCCAGCCTGTGCTCCGAATATTGCGCTGGCCATTGGGCCATTC
GATACCTATGTTGATCCACATATGAATGAAGTGACACATTACTGTTTGCCTCATCTCCTA
CAAATTCTCAAGAACACTGTGAGATATTTGCATGAGGCCTTTGAATTTTATGAAGAAACA
CTATCTACAAGATATCCTTACCCGTGTTATAAGCAAGTGTTTGTTGATGAGACGGAAGAT
GATGCAACGGCATACACAACAATGTCAATACTTAGCACGCATCTTCTTCATTCAATTGCC
ATCATAGATCAAACATACATCAGTAGAAAGGCCATGGCCCAAGCTGTGGCTGAACAATTC
TTTGGCTGTTTTATAACTATGCAGAACTGGTCCGATCTGTGGCTTGCCAAGGGTATACCT
GATTACTTGTGTGGTCTTTACTCTAAGAAGTGCTTTGGTAATAATGAGTACAGATATTGG
ATTCAACAGGAATTACAAGAGGTGGTGAGTTACGAAGAGCATTATGGTGGTATAGTCCTC
GATCCATGGCAGCCGCCAGCAAGCGGAGCTCGTGTTGAACCCAAGGACGTTTTCTATTTC
CCTGTCAGAAATGTACACACCATGTCCCCTAGATATATCGAGGTAATGCGAAAGAAATCC
CATCTGGTATTGCGGATGTTAGAACAACGAATAGGCCAAGAGCTGTTGTTACAAGTATTC
AATAAACAGCTTTCGTTAGCAACAAACGCAGCAAACACAAAAATCGGTAGCGGTTTGTGG
GGACATCTGCTTTTATCGACAAATTTGTTTGTCAAAGCTATATTTACTGTGACTGGCAAA
GATATGGCCGTGTTTGTAGATCAGTGGGTTAGAACGGGCGGGCATGCTAAGTTTCAATTG
ACTTCCGTTTTCAACAGGAAAAGAAATACAGTTGAATTGGAAATTCGTCAAGACAGCGTT
CATGAGCGTGGGATCAGGAAGTATGTGGGGCCTCTCTTAGTCCAACTACAAGAATTAGAT
GGAACTTTCAAACATACTTTGCAAATAGAAAATACTGTTGTAAAAGCGGATATCACGTGC
CACAGTAAGAGTAGGAGGAATAAAAAGAAGAAAATTCCATTATGCACTGGAGAGGAAGTT
GACATGGATTTATCTGCTATGGATGACTCACCAGTACTATGGATTCGGCTGGACCCAGAG
ATGTCCCTCTTACGAAGTACAGTGATATCCCAACCGGATTACCAATGGCAGTACCAATTA
CGTCACGAACGTGACGTCACAGCTCAAAGCGAGGCTATAGACGCGCTCCACAACTACCCC
GAACCAGCTACCAGGAAGGCCTTGACGGATATCATAGAGAATGAACAAACACATTATAAA
ATCCGATGCCGGGCCGCGCACTGTTTGACTAAGGTTGCTAATGCCATGATAAGCTCGTGG
GCGGGACCGCCGGCTATGTTGACGATATTCAGGAAAATGTTCGGATCATTCGCCGCACCG
CACATCATCAAACAAAATAACTTCGATAATCTACAACATTACTTTTTGCAGAAAACTATA
CCTGTTGCTATGGCCGGTTTGAGAAATATCCATGGTATATGTCCACCGGAAGTCGTAAGA
TTTCTATTGGATCTGTTCAAATATAACGATAATTCAAAGAACCACTTCTCTGACAACTAT
TACAAAGCTGCTCTAGTCGATGCGCTGGCTGCAACCATAACTCCCGTCATATCTGTTTTA
CAACCCGGTGCTCCAATAACCGCGGAATCGTTATCAGCAGACACGCGTTTGGTCCTCGAA
GAGATAACGCGCGTGTTGAATCTGGAGAAGGTGCTGCCGTGCTACAAAAACACGGTGACA
GTCAGTTGTCTACGAGCTATCAGACGTTTACAGCAGTGTGGTCACTTGCCCAGTATACCC
ACAGTGTTTAGAGCGTACGCGCAATACGGGCAGTATATAGATGTGCGTTTAGCAGCGTTT
GAGGGTCTAGTGGACTTCGTACGAGTGGACGGCAAGCCAGAGGACCTGTCATATCTGTTG
ACCGCTATAGAGAACGACCCTGACCCTGGCGTGAGGCATGGTCTGGCGCGACTCATGGTC
TCAATGCCGCCCTTCGAGAGAGCTCAGAGACATAGACTGGATACGGAATCCGTCGTTCAT
AGATTATGGAACAACATAAATAGTCAATTATCAAATGATGCAAGGTTGAGATGCGATCTC
GTCGACTTGTATTACACGCTGTATGGCCTCAAACGACCTATATGCGTGCCCTTGCCCGAA
ATTCAGGCCATGATGAAACAGATGCATCACAAGGAAAGAGAAAGACTTGACAGAGAAAGA
GAACGAGCAGAGAGGGGGAGGGAGAAGGAGAAAATAAGAGAAATGGACATAAAACCGGTT
ATCAAACAAGAAATTGAGGATATACCTGTGAAAGATGAGTTAGATATGGGTTTAGATGAG
ACGATGCAAGTAAGTGAGTTACCAGTACCGGTGTCAAGCATTAAGGAGGAAGATGACAAA
ATTGATGTCACAACAGTCCATGAGTTGCCGATCAGGGTTTACAGTGACGATTCCAAACGC
GAGTTTTCATCAGATAATGCGGTTCCTCTTCCCGGTATTCCGGGCTCGTGTGGTCCTGTG
GGCTTCGAGCCGGGAATGTTTAAACTGGAGAGAGATGACCCAGCTGCACCGAAGGCCAAA
AAGAAGAAGAAGGAGAAAAAGAAGCACAAACACAAGCACAAGCACAAACACAGCAAAGAA
AAAAGCAAAGACAAAGACAAGCTGCCGCGTCCTCCCTCCACAGACACGCTTCGTATTAAA
GAAGAGACGAGGGAAACGCTGAGTTCATTCAGCTCAAGTCAGAGCCCCTCGGAAGATATA
TCATCAATGCCATCTAATATGAGTTTCTAA
Protein sequence:
MKKERTGDNCRPFKLAHQILSLTGISFERRSVIGFVELTIVPLKDNLRYIRLNAKQCRIY
RVCLNDQYEANFQYFDPFLDICQSDANTRSLEVFSQNHLSAAQKTDPDHNSGELHIQVPD
DAAHLVGEGRGLRIGIEFSLESPQGGMHFVVPEGEGTMVEKSAHMFTYGHSARLWFPCVD
SFAEPCTWKLEFTVDETFTAVSCGELLDVVYTPDHRRKTFHYVVNTPACAPNIALAIGPF
DTYVDPHMNEVTHYCLPHLLQILKNTVRYLHEAFEFYEETLSTRYPYPCYKQVFVDETED
DATAYTTMSILSTHLLHSIAIIDQTYISRKAMAQAVAEQFFGCFITMQNWSDLWLAKGIP
DYLCGLYSKKCFGNNEYRYWIQQELQEVVSYEEHYGGIVLDPWQPPASGARVEPKDVFYF
PVRNVHTMSPRYIEVMRKKSHLVLRMLEQRIGQELLLQVFNKQLSLATNAANTKIGSGLW
GHLLLSTNLFVKAIFTVTGKDMAVFVDQWVRTGGHAKFQLTSVFNRKRNTVELEIRQDSV
HERGIRKYVGPLLVQLQELDGTFKHTLQIENTVVKADITCHSKSRRNKKKKIPLCTGEEV
DMDLSAMDDSPVLWIRLDPEMSLLRSTVISQPDYQWQYQLRHERDVTAQSEAIDALHNYP
EPATRKALTDIIENEQTHYKIRCRAAHCLTKVANAMISSWAGPPAMLTIFRKMFGSFAAP
HIIKQNNFDNLQHYFLQKTIPVAMAGLRNIHGICPPEVVRFLLDLFKYNDNSKNHFSDNY
YKAALVDALAATITPVISVLQPGAPITAESLSADTRLVLEEITRVLNLEKVLPCYKNTVT
VSCLRAIRRLQQCGHLPSIPTVFRAYAQYGQYIDVRLAAFEGLVDFVRVDGKPEDLSYLL
TAIENDPDPGVRHGLARLMVSMPPFERAQRHRLDTESVVHRLWNNINSQLSNDARLRCDL
VDLYYTLYGLKRPICVPLPEIQAMMKQMHHKERERLDRERERAERGREKEKIREMDIKPV
IKQEIEDIPVKDELDMGLDETMQVSELPVPVSSIKEEDDKIDVTTVHELPIRVYSDDSKR
EFSSDNAVPLPGIPGSCGPVGFEPGMFKLERDDPAAPKAKKKKKEKKKHKHKHKHKHSKE
KSKDKDKLPRPPSTDTLRIKEETRETLSSFSSSQSPSEDISSMPSNMSF