| New model in OGS2.0 | DPOGS208029 |
|---|---|
| Genomic Position | scaffold538:- 58342-77712 |
| See gene structure | |
| CDS Length | 3714 |
| Paired RNAseq reads | 1597 |
| Single RNAseq reads | 3700 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001497 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | SC element binding protein [Bombyx mori] (9e-75) |
| Best NR hit (blastx) | SC element binding protein [Bombyx mori] (6e-60) |
| GeneOntology terms | ND |
| InterPro families | ND |
| Orthology group | MCL12960 |
Nucleotide sequence:
ATGCGGCACGCTGCGTCCTCAGCAGCTTGGACAGCTCCAGGCGAGGTGTGGGAGTATGTC
AGCCAGCTGGTTAGCTCCTACCACGACCAGCACGACTGTCAGTTCGCGTCTTCGGCTGCG
GAGGGCGGTGCGTGCGGCAGCAGTACATCTTCTTCCACGTCATCGTCATCGTCTTCTTCG
TCATCGTCATCCTCGTCAGACTCGGACACAGCGGACGCTGCGGGTGTTCACGCCTCGCCA
GATGACTCCAGTGCAGCCCTGGCAGCGGCGTGTCAGTTGCAGGTCATCGACGATGCAGAC
CTCGCTGAACTATTTCCAGAACAAACTTCGAGCGCGCCGACGCAACAGCCCAATTTCACG
ACCTTTTCAGTTCACAATGCATCGCCGGAAAACGACGACAAATCCATAGCCGACAATGGC
GATGGTTCAAGTAGTGAGATGGAACTAACACCACAGCTAGTAACAGCGGCTATACAGAGA
GCGACGGCGGACTCATCAGGCTCGGAGAATGAGTGCTCCAATTCCGATACAGTGCATCAA
AATACGTCGCATTACGCTTCTAGTTTATTGCAACAGTTTGTAGCACAAACTCAACTACTG
AGCAGCACAGCGCCGCTTCCATCTATGAACTCTGCTGGATCTTCGTCGTTGAGCTGTGCA
CTGTCAACGAACTCAATAGATGGGGTCGGAGCCATCAGCGATTGTGTACTAGGACAAATC
AATAGTCTACCAGAAATACCCGCGATCTCGTCCAACTATTTAAATAACCAACATTTGAGT
CCGCAACAGACAGAAGAATTATCTCAAATAAATAAAGATCTAGAGGAAATTTCATCAGTC
ACGGAGGCTGTCGGTCTATCGATAACAAATCCGCCTAGTTTGGAAGACTGTGTCGATAAC
AACGACTTTATGAACTTGGACATAGCTTCAGGTGGATCAGAAATAGGCAGTGCGAGTGAT
CTTCTAAAGAGTTCGCCTATTACTGTAACTAATGAATCCGGATCAGTTAGTCAAATAGAC
GCTCAAAAGCTAGATACAATCAGTACAATTTCTGTAGAATCTCTGGATGATGTTAAGAAC
ATTATTGTCGAATCTAGAAGGAAGAGAGGTCGACCTCGCAAAGTTAGGAAAATAGACGAA
TACGATAATAAATGTGTTGAATCTCATAAGAATACTAAATCTAGAGTTAATGTTATAAAT
GACTTCGATAACAACAATGATCCTCCGAACGTTTCGCCCGATTCTGGAATTTTGTCAAAT
CACAATTCTCCAACACATTCACCATTGAGAAGGCATAACGAAGAAACCCAAGGTAGGCAC
AACAGGAAATCAGTCCAGAAAGAAAACACTAAGGTGGAGAGAAAAAGTGTACGCTCAAAG
TCCAAAACCAGAAGTAGGGGACATAGATCAGATTCGAGCGATTGTGATTTCCATAAGAAA
AGATTAGAAAATGACATCAAACAAATCAAAACCGAGGCACCTTCACCTATACCGCTCAAA
CAAGAGCAAAATAAATTAGACAAAACGAAAAAGAATGACCAAAAATTAGACATAGCGGCA
TTAGACAGAATGCTGTATGCCACAGACAGAGTTTTATATCCACCCAGAAAGAAGGTCGGT
CGTAAACCGCAGAACAAAACAAAAAATGCTAAAGCTACGCCAAAAACTTTACGAGATAAA
AATCAATACGACTCCGCGGACAGCGACAACGATTCACTATCGTGCAACAAATCCGTTCTG
TCCGGTGTTTACGCTAAGAGGAAAGAGGTGAACAGCAAACTAGCTAATGTGTCCAAGAGC
AATAAAACTAGTAAAACCAACAATTCATGGAGAGATCATCAGAGTGAGAACGAAGCCGCC
GCTGACGATCCTCTGGACCCGACGTGGAAACAAATAGATCTAAACCCGAAATATAAAGAC
ATTTTATCGGGCTACAAAAGCGATTATGAATTCAAACCCTATAAAAGTTGCAGTAGGTTA
ATAGAGTCGGGTTATAAAAGTGATTATGGCTGCAGATCAGGTTATAAAACTGATTGCTAT
CGCTCCGGCTACAAGAGCGATCATAAGTCAGGTTACAAGAGCGATAAATCTGGATATAAA
ACAGATTACAGCATAAGGAGTATGCGGCGGCGAACGAGGAAGTTGAAGAAAACGAGGTCC
GTAAGAAATAGGTCTTATTACAAAAATCAAAAGCATTTCGTATCGGACCAAGAAATAGTG
CTACTGTCTAATAAAACATTCAGTAGCTTAAACTTGGGACACAGTTCCAGTGATTCGGAA
TGCGAACCTTATTTAAGGAAACCAAATGCTAGTCCAAAATACGTAAGCGTCTGTACTAAA
TATCCGCTACCATCGAAATATAACTACGCCTTCTCTAAATCAAACCAAAAACATATATTG
AGACCGAACTCCGCTGACCCGTTTGCCCCCGGTCCGGTATTCAGCGGATTGCAACGGCCG
GTTACCACTTATAATATCTTTAAAGTGAGTCATAATAATAACAACACACTACTTAAGTCG
CCCGTTAAAAGTGGTAATTGTGCTAATATCTTGCCCTCATTAAAACCATCTTTCACTCAT
AAATTCGGCGTCTCTCCAATTTGTTCCACTCTTAAATCAAAAAAGGAAGAAATCTCCAAA
CATTTTACTAGAACGCTATCACCTAAAGGCAGAAAAATTTCTAAAAAGGATTCACCGATA
CGAAAGAAGGAGACACTGAAACCATTACCCAGTATATTTGAAAAGGCTAAAAATATCTAT
GTACCGAATAAGTCATTATCAAGAAATGTTTTTTTGAATTTTAAAAGGCCTCATATAAAA
CCGACGTTCCATACAAAAAAACCAAGAAGAACCGTTGTACTCGCACCTCCAAAAATTAAT
TTGAAGCCTACAGAAAGGCCATCTCGAATAACAATTAAGACTGAAAGTAAACATCACAGG
CACAGAAGTAAACGTAGACATCGGTCGAGATCAGTGTCAAGGTGTAGAGAGAGTAGAAAC
TCTGTGGACTCAGTAGATCAAAAATTTACCCAAAACATGGATGTGCTGATCGAGAATTTT
ATGAAACTTTGCCAAATTGCTCCAAAATTCGTCGCTAGTGCTCCTCAAATACAGCAAAGA
AATGTTGAAAAAGATAAGCCCCAGCCGGAGACTGCGCCGACTAAAGTAATAAAAAGGGCG
TCTAAAAAACGAAAGACCTCGGATAATCAGGAAATAGCAACGCCTACTTCAAAGCGTAGA
CACAAGAAACAGTTGACGGAATCACAAAATAAAGGAGGGAAAGAGACGAATGAACACAAA
CTGCCCCTCAAGAAGAGACATTACCACATCAATTCCTCTACGAGCAACTCTTTGAGCCTC
AGTTTGGTCACAGCGGAGTTTGATGAAAACTCGAAGACTGGAAGTGGTTCCGAACAGTTC
TTATGTACTGAAACTGACTGTATGGGCGATGTGAATGATAAGTTGTCCGACGAATCTTCT
AAACAGAAATCAACATCTGAAAAGAGTAAAAGGGATGCGAAGAATATCCCAACGGATTCC
AAATCTCAAAGTCTTGAATCTCTTCCGAAACCGACTAAATCTTCCACGGACACGTGCCCT
TCTAAAGAAGTCATGGAACGGTTAGCGGGGCCGATGATGATTTACCTATATCAAAGCCCA
CTGATGAACAATCTGAATTATCGAAGAAAATTTATGAAACTTCGGAAAAACTGA
Protein sequence:
MRHAASSAAWTAPGEVWEYVSQLVSSYHDQHDCQFASSAAEGGACGSSTSSSTSSSSSSS
SSSSSSDSDTADAAGVHASPDDSSAALAAACQLQVIDDADLAELFPEQTSSAPTQQPNFT
TFSVHNASPENDDKSIADNGDGSSSEMELTPQLVTAAIQRATADSSGSENECSNSDTVHQ
NTSHYASSLLQQFVAQTQLLSSTAPLPSMNSAGSSSLSCALSTNSIDGVGAISDCVLGQI
NSLPEIPAISSNYLNNQHLSPQQTEELSQINKDLEEISSVTEAVGLSITNPPSLEDCVDN
NDFMNLDIASGGSEIGSASDLLKSSPITVTNESGSVSQIDAQKLDTISTISVESLDDVKN
IIVESRRKRGRPRKVRKIDEYDNKCVESHKNTKSRVNVINDFDNNNDPPNVSPDSGILSN
HNSPTHSPLRRHNEETQGRHNRKSVQKENTKVERKSVRSKSKTRSRGHRSDSSDCDFHKK
RLENDIKQIKTEAPSPIPLKQEQNKLDKTKKNDQKLDIAALDRMLYATDRVLYPPRKKVG
RKPQNKTKNAKATPKTLRDKNQYDSADSDNDSLSCNKSVLSGVYAKRKEVNSKLANVSKS
NKTSKTNNSWRDHQSENEAAADDPLDPTWKQIDLNPKYKDILSGYKSDYEFKPYKSCSRL
IESGYKSDYGCRSGYKTDCYRSGYKSDHKSGYKSDKSGYKTDYSIRSMRRRTRKLKKTRS
VRNRSYYKNQKHFVSDQEIVLLSNKTFSSLNLGHSSSDSECEPYLRKPNASPKYVSVCTK
YPLPSKYNYAFSKSNQKHILRPNSADPFAPGPVFSGLQRPVTTYNIFKVSHNNNNTLLKS
PVKSGNCANILPSLKPSFTHKFGVSPICSTLKSKKEEISKHFTRTLSPKGRKISKKDSPI
RKKETLKPLPSIFEKAKNIYVPNKSLSRNVFLNFKRPHIKPTFHTKKPRRTVVLAPPKIN
LKPTERPSRITIKTESKHHRHRSKRRHRSRSVSRCRESRNSVDSVDQKFTQNMDVLIENF
MKLCQIAPKFVASAPQIQQRNVEKDKPQPETAPTKVIKRASKKRKTSDNQEIATPTSKRR
HKKQLTESQNKGGKETNEHKLPLKKRHYHINSSTSNSLSLSLVTAEFDENSKTGSGSEQF
LCTETDCMGDVNDKLSDESSKQKSTSEKSKRDAKNIPTDSKSQSLESLPKPTKSSTDTCP
SKEVMERLAGPMMIYLYQSPLMNNLNYRRKFMKLRKN