| New model in OGS2.0 | DPOGS207838 |
|---|---|
| Genomic Position | scaffold674:- 30588-33719 |
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 693 |
| Single RNAseq reads | 1586 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005520 (0.0) |
| Best Drosophila hit | Gga (2e-23) |
| Best Human hit | ADP-ribosylation factor-binding protein GGA1 isoform 4 (6e-66) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012299 [Tribolium castaneum] (3e-128) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012299 [Tribolium castaneum] (4e-116) |
| GeneOntology terms | GO:0005768 endosome GO:0005622 intracellular GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport GO:0003674 molecular_function GO:0030117 membrane coat GO:0005515 protein binding GO:0010008 endosome membrane GO:0005794 Golgi apparatus GO:0044431 Golgi apparatus part GO:0030131 clathrin adaptor complex GO:0016020 membrane |
| InterPro families | IPR002014 VHS IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain IPR004152 GAT IPR008153 Clathrin adaptor, gamma-adaptin, appendage IPR018205 VHS subgroup IPR008942 ENTH/VHS IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain |
| Orthology group | MCL11052 |
Nucleotide sequence:
ATGAATATCACACTAACAAGCTTGGAAGCGTTAATCTTAAAAGCAACTCACGAATCTCTA
CCACAACCTGATGTTGCTGCTTTGGAAGCTTTCTATACTATAATGCGAGAGTCAGCAGAA
GGCCCACAATATGCCGCTCAAGCCTTAGCAGCCCGTATTCACTCACCAAATGCTCGAGAA
GCTATTTTAGCATTATCCATGTTAGATCGTTGTATGCGTCGTGGAGATGCTAATTTTCAC
TCTGAGATTGGCAAGTTTCGGTTTCTTAATGAAATGATTAAACTCGTTTCACCTAAACAT
TTTGCAGACAAAACTGCACCTGAAGTGAGGACAATGGTTCTCCAACTTATACATGCCTGG
TCGATAGAATTTCCAAAAGAAACCAAGTTTAAAGTTGCTTATGACATGCTCAAAAACCAA
GGGGTCATCAAAGAAACCCCTCCACCACTACCTCCAGAGGATACAAACATTCCTCGCTTG
AGAGCAAAGAATGCTATATTTGAAGATGAGGAAAAATCTAAGTTATTGCAGAAGTTACTC
CAAAGCAAAAAGCCAGAAGACCTGCAGCATGCCAATAGACTTATTAAAACTATGGTTCGA
GAAGAGGAGAGGCGGACAGAAGCGAATAGCCGTAAAGCTCAGGAGGTTATAGCGGCTCTG
GATAGTGCAGGGCTACTAAAAGACCTGCTGGAACATTCAGCAGACGCGTCTGCTGATGAG
GAGCAGCTGATTCATGAACTGCATGCTAGCTGTGTTCGACTGCGGCCAGTACTGCAAAGA
CTGGCATCTTCGGATGCTCAGGCAGATAACTTATCGGAAATATTACATGCAAGTGATGTT
CTCGATGAGGTGTTCGAGGAATACAATAAGTTTATTAATGACAAGAAAAACAAATCAAAC
GGTAATACAGCTGGTTCTCAGACTAATAACAGTTTGTTGGACTTTGCGGGAGCCAGCATT
AACTCACATCAACAAAAAACAAATCCTTCGACGATTGATGAGCTAGGAGATATCTTCAAT
AACGACGGTGAAGTCACTAATATTGCAGAGCCATTGAAGCCTGTTAATTTGATGACTATA
GAAGATAATGGGAAACAGGAAACGAAAGACAAGAAAGTTGAAGGGTGGCATGAACTGGAC
ACATTGGGTGAACAGTTAATGAAACAATCATTACCTAATAGTGTCAAACGTCTCGATAAT
TTTAACAGTAAACATTCAAAGAAGATACCCATGAATGCTTTGGAGACGACCTCACCTAAA
CATGACACACAAACGGCTAACAATAACGCAATACTTGACTTAGATTTCTTCACAAAGAAA
GTAGAGAAAGTTGTCAATATCTCCCCACAGGCACATTCATCAAAACCAACCACTCCAAAT
GATGATGTGATGGTAGATATCAGTTCAGACGATCAAACCAACTATGTCGAAAATATATGT
CTCCCGAAGGACAGTTCAGCAGACAATATTATAGATATAGGACTAACGGGTGACAATAAG
ACAAATAGTATTATAGCAGACGACAGAAAGGAGATAATTAAGGCTGAACAAAAAGATATG
AAAAGTAAATGTGATTTGAAACCTCTATCAGACATAAATGTCACCCTACAAAGTGTGCAC
CCCAGTAAAGTACCTCCGATGACAGCGTTTGAGGAAGAAGATGGTTTGAAGGTGGTGCTG
CATTTCTGTAAAGATAAACCGAGGCCTGATGTCAATGTTGTTGTTATATCAACTACAAGT
AATAGTAAGATGCCCATTGAGGAATACAAGTTCCAAGCTGTCGTTCCTAAGGGTTGTAAG
GTCCGTTTGTTAGAAGCATCCGGTACGTCACTTCCGGTGTATAACCCGTTCCTGCCACCA
CCAGCTTTAACACAGCTCATGTTGCTGGCAACGCCATCGTCCACATCACTACAACTTCGT
TTCGTACTCACATACACCATCGAGGGGGACACGTGCAGCGAAATGGGCGAAGTGGTATTG
CCACTTCAAGATATATAA
Protein sequence:
MNITLTSLEALILKATHESLPQPDVAALEAFYTIMRESAEGPQYAAQALAARIHSPNARE
AILALSMLDRCMRRGDANFHSEIGKFRFLNEMIKLVSPKHFADKTAPEVRTMVLQLIHAW
SIEFPKETKFKVAYDMLKNQGVIKETPPPLPPEDTNIPRLRAKNAIFEDEEKSKLLQKLL
QSKKPEDLQHANRLIKTMVREEERRTEANSRKAQEVIAALDSAGLLKDLLEHSADASADE
EQLIHELHASCVRLRPVLQRLASSDAQADNLSEILHASDVLDEVFEEYNKFINDKKNKSN
GNTAGSQTNNSLLDFAGASINSHQQKTNPSTIDELGDIFNNDGEVTNIAEPLKPVNLMTI
EDNGKQETKDKKVEGWHELDTLGEQLMKQSLPNSVKRLDNFNSKHSKKIPMNALETTSPK
HDTQTANNNAILDLDFFTKKVEKVVNISPQAHSSKPTTPNDDVMVDISSDDQTNYVENIC
LPKDSSADNIIDIGLTGDNKTNSIIADDRKEIIKAEQKDMKSKCDLKPLSDINVTLQSVH
PSKVPPMTAFEEEDGLKVVLHFCKDKPRPDVNVVVISTTSNSKMPIEEYKFQAVVPKGCK
VRLLEASGTSLPVYNPFLPPPALTQLMLLATPSSTSLQLRFVLTYTIEGDTCSEMGEVVL
PLQDI