| New model in OGS2.0 | DPOGS207726 |
|---|---|
| Genomic Position | scaffold674:+ 23030-24488 |
| See gene structure | |
| CDS Length | 543 |
| Paired RNAseq reads | 4967 |
| Single RNAseq reads | 13633 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005289 (5e-26) |
| Best Drosophila hit | high mobility group protein D, isoform C (4e-20) |
| Best Human hit | FACT complex subunit SSRP1 (1e-13) |
| Best NR hit (blastp) | mobility group protein 1B [Bombyx mori] (4e-31) |
| Best NR hit (blastx) | mobility group protein 1B [Bombyx mori] (4e-33) |
| GeneOntology terms | GO:0000790 nuclear chromatin GO:0006325 chromatin organization GO:0003680 AT DNA binding GO:0008301 DNA bending activity GO:0007517 muscle organ development GO:0048813 dendrite morphogenesis |
| InterPro families | IPR000910 High mobility group, HMG1/HMG2 IPR009071 High mobility group, superfamily |
| Orthology group | MCL18312 |
Nucleotide sequence:
ATGCATGTCACGGATATACGTGGCGCTGCGGTAGCGACGCGAGACGGCCCCAAGCTAGCT
TGCACTGGGAACATTACTTCGAGCCCCATACATTTTCTTCTGGTTCTCTACGTCTGCAGT
TTGGTTGTGTACCAGTTCAAAAATTATTTCAAAATTTTTGCCATCAGGAAAAAAGTTAAA
ATGACGGACAAGCCGAAGCGTCCTATGTCAGCATATATGCTTTGGCTAAATAGTGCACGA
GAACAAATTAAGTCCGAAAATCCGGGACTTAAAGTTACCGAAATTGCCAAAAAGGGAGGC
GAAATATGGAGATCAATGAAAGACAAGACTGTTTGGGAGGAAAAGGCGGCTAAAGCTAAG
GAGCAATACACAAAAGACTTGGAGTCATATAATGCTAATGGAGGCGGTGGTGAAGGTGGC
GGTAAAAAGGCACAGAAAAGAGGAAAGAAGGGCAAGAAAGCTTCCCCTGCTAAGGCAAAG
AAGAAGAAGGAGGAATCAGATGAAGAAGAAGCTGGTGAGGAGGAAGAGGAAGAAAGCGAA
TGA
Protein sequence:
MHVTDIRGAAVATRDGPKLACTGNITSSPIHFLLVLYVCSLVVYQFKNYFKIFAIRKKVK
MTDKPKRPMSAYMLWLNSAREQIKSENPGLKVTEIAKKGGEIWRSMKDKTVWEEKAAKAK
EQYTKDLESYNANGGGGEGGGKKAQKRGKKGKKASPAKAKKKKEESDEEEAGEEEEEESE