| New model in OGS2.0 | DPOGS215505 |
|---|---|
| Genomic Position | scaffold1847:+ 26841-28584 |
| See gene structure | |
| CDS Length | 1044 |
| Paired RNAseq reads | 185 |
| Single RNAseq reads | 539 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009204 (1e-131) |
| Best Drosophila hit | slow termination of phototransduction, isoform A (3e-75) |
| Best Human hit | ND |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL005443 [Aedes aegypti] (1e-84) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL005443 [Aedes aegypti] (3e-83) |
| GeneOntology terms | GO:0023034 intracellular signaling pathway GO:0016059 deactivation of rhodopsin mediated signaling |
| InterPro families | IPR001496 SOCS protein, C-terminal |
| Orthology group | MCL17501 |
Nucleotide sequence:
ATGACCACGCGACTTAATATGGATTCTTTTATGGATTTTTATTTTGAAGAAGTGTTTACC
CATATTGAGCGAGATGGTCTGAATGAGAGATATAAGAGAAGAGAATTAGTCGAGTATTTC
CATTCAGTTATCGCTGGATGTGCCAAAGGTCAAAACCAGTCGGATAACGAAACTTGTAAA
GCTTTCGTGTCATCTGCGGTACGTTTTCACAATCGTTGTAAGTCTGCTAATGGCGATGTT
TGTCTTATGGGGAAGTATCATAATCTTCTATACATTGCTATGAAGCTGGCTTTTGATTGG
AGCCTTCAAGACAATGGAATGGTTGGCGCATTATTGGATGAATTGTACGCTTGTGAAGGA
ACATTTGAAAGAATATTTCTCGGTGCAATTTTTGGGACATCAGCTCCGTATTTTCTAGCT
GGTTGGAAATCTGATTTCATGGATAAAGAAGAGAATATCCATGCTCTCGTCTTTTTTCTT
GACCACGCAACAAATGCCAGCTTAGAATTTAATGATGGTTCAAAGAAGTATCGTTTTATT
GACGTGCCTTTAGAAAGTTGTGGAAAGGCTTCCCCAGTTAGAGTTGTAATACAAATGGGA
GCATCAGAAATTTTGATGATACTACTACGGTTTGGTGCGCAGTTTACATCAGATCATGTT
TCTTCAAACCCCGTTGAGTGCATTCTTGATAGACTAAAGGAGTATAATAGAAAATATCCT
TATGAACTGGTAGCATGTCTTAAACTCGCATTAAGAGCAGTCCCAAGCCTCAGTCTAACA
GTCGACAGAGCAGCTTTAAAACATTTAAATTTACCAGACGATTATAATTATCAAAGGAAG
ATTGCTCTTGAAAGATACGGCGAAATACTTGAAGATCATTTACTACCCAGTTCAAGATGT
GGTTTGAAACCAGTGGAGTTGAAACATCTTTGTAGATGCCAAATAAGACAAATGTTGTGG
CAAAATTTTGAGCTTCCATTCGGTATTCAAAAACTTCCTCTACCCATTTCACTTAAGAAG
TATTTGGATTTGTTCGATGATTAA
Protein sequence:
MTTRLNMDSFMDFYFEEVFTHIERDGLNERYKRRELVEYFHSVIAGCAKGQNQSDNETCK
AFVSSAVRFHNRCKSANGDVCLMGKYHNLLYIAMKLAFDWSLQDNGMVGALLDELYACEG
TFERIFLGAIFGTSAPYFLAGWKSDFMDKEENIHALVFFLDHATNASLEFNDGSKKYRFI
DVPLESCGKASPVRVVIQMGASEILMILLRFGAQFTSDHVSSNPVECILDRLKEYNRKYP
YELVACLKLALRAVPSLSLTVDRAALKHLNLPDDYNYQRKIALERYGEILEDHLLPSSRC
GLKPVELKHLCRCQIRQMLWQNFELPFGIQKLPLPISLKKYLDLFDD