| New model in OGS2.0 | DPOGS200424 |
|---|---|
| Genomic Position | scaffold2511:- 5193-10602 |
| See gene structure | |
| CDS Length | 3066 |
| Paired RNAseq reads | 572 |
| Single RNAseq reads | 1528 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008997 (0.0) |
| Best Drosophila hit | CG9323 (2e-128) |
| Best Human hit | probable ATP-dependent RNA helicase DHX36 isoform 1 (9e-127) |
| Best NR hit (blastp) | PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (3e-166) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0005524 ATP binding GO:0003676 nucleic acid binding |
| InterPro families | IPR007502 Helicase-associated domain IPR001650 Helicase, C-terminal IPR011709 Domain of unknown function DUF1605 IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014001 DEAD-like helicase IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
| Orthology group | MCL10204 |
Nucleotide sequence:
ATGTCTCGCGATTTCCAAAACTTTAGCCGACCCCGTGGTAGAGGTAGAAATTGGGATCAA
TCCCAACGAAATCATCGAACAAGACCTCCAGGACTTCGCGGAGCCGAAATTGGTTTATAT
TACAAAGAACTCAGCATGAAAAAAAAGAAAAAAGAGCCCGTGATAAATCTCAAAATCCCT
TACTCAGTTCTCAAAGCATTAGAAAATGAATTAATAGCCATAAGGAAAATTGCTAGTACA
CAAAATATCACGTTACCAACAAAATTAACACAGAAATGTGAAAAAGAACAAGGTGAATAT
AATTTAACTAGTAAACCTGGAGTTTCAAGTAGAGAAAATTTTATGGACACCAATACCAAG
GATAAATGTGACTCTAACTCTGGACAAAAACAGCAGTCTACCAGGATGTATGATTATAAA
TATGGATATGAAGATATCATAACAGGCTCATTTGATGAAAAACTCGACCAATGCATTACA
AAAGGTATTACTATAAATACATGTGATGATGAGGTAGAAAGTTTAAATGAAGCATTCTTT
ATTGAGTATGAGGATATGTTGGAGAGGAATACTTATAAAAATATGTTGAAATTCCGCAAG
AAATTACCAGCATACATAAAAGCCAAAGAATTGATTAAATCAATAAACGACAACCAAGTA
ATTGTTATTAGTGGAGAGACTGGTTGTGGAAAGTCAACTCAAGTACCACAAATCATCTTA
GATCATGCTATTTGTAGCAAAAAAGGTGCCCATACTAAGATTTTGGTCACCCAACCGAGA
AGAATTGCCGCCTCCTCACTGGCTATCCGAGTGGCTAAAGAAAGGGCAGAAAAGCTGGGC
AATTCAGTGGGTTATGCTGTGAGATTAGAAAAGGTTGACGAGAGGTCTCGGGGGAGTATA
CAGTATTGTACAACTGGTATACTTTTGGCTGAACTGGAAGTAAACCAGGGTCTAACCAAC
TATAGTCACGTTATATTGGATGAAGTACACGAAAGAGATGTTCATGTTGATTTATCTATG
TGCATGTTGCGAAAGGTTTTAAGAAAACGTAAAAATCTTAAACTAATTCTTATGAGTGCT
ACATTGGATGCTGAGAGCTTATCAGCTTACTTTGACAACTGCCCTCTAATGCACATCGAA
GGACTGGCATATCCAGTACAAGATGTATATCTAGAGGATATATTGAATTTAACAAACTTC
ACACTACCCACCGAAAGACCGAAAGCACCGCAGGCTAAGTGGATGAAGTATAGAAAAAAA
AATGTTTCAGATGCCATGGAAACAGACATCCAATACAGAGCTGAAATTGGCAACTGGCTG
GAATCAAAGAAGAAAAATCTTAGTCTTCAAACATATAAAACTCTGCAAGACAGTAGAATT
GAGGAGCTAAGTTTTGAATTGCTAGTTGATCTTTTGATCTACATCTGCAAGGGTGAACCT
GGCGCAATACTAGTGTTTCTACCTGGCATCGGCGATATTACAAAACTGATGCGAATGATG
GAATCCACAAATTTATTCCCAGCTAACAAATACGAAATTTATCCTCTGCATTCAAGGTTG
CCAACATTAGAACAACATAAAATATTTGAAAGGCCACCAGATAATATTAGGAAAATAATA
ATAGCGACTAATATAGCTGAAACATCCATAACCATAGATGATGTTGTGTATGTAGTGGAT
TCAGCCAGGATAAAAATGAAAGGGCTGAATGTTGAGATGAATCTATCAACGTTGCAGACA
GAATGGGTGTCTCAAGCAAATTTGCGACAACGGCGTGGGCGCGCTGGTAGATGTCAGCCA
GGTATATGCTACCATTTGTTAACTTCATTCAGAGCTGAAAAACTAGAAGAACGTACACTA
CCGGAGTTACAAAGGAGTGATCTTTTGGAGCCGGTGCTCATGATTAAGAGGCTCCGCTTG
GGTTTGGCTGAAGATGCACTGAAGATGGTGCCATCGCCACCAGCAGATTCAACAATACAA
TCAGCAGTGAAACATTTGCAAAGGTGTGGGGCCCTCAATACAGTGGAAACTCTTACTCCT
TTGGGCTGGCACCTGGCACGTCTTCCAGTTCATCCAGCTGCTGGCAAACTGCTTGTTCTG
GGAGCTCTTGCCGGATGCCTCGACAGGGCTGCGAGCCTCGCAGCCGTCTGGGGCTTCAAA
GAACCCTTTCAGATGGTTATTGGTAAAGAGTACGAAGTGGATATGGCGAAGCGTGAATTC
GCGATGGGCGAACCCAGCGACCATATCGCAGCTTCGGAAGCGATAATTCAATGGGAAAAC
TGTCCAAGAAGAGAGAGGTCATCATTTGCGTATAGGAACTTCCTGTCGAACAATACTTTG
GAATTGCTTGTCGGTATGAAAAATCAGTTCGGGGACAACTTGAGACAGATGGGCTTCCTA
CGTTCCGGTAACGTCAGGTCTAAATGGGAAAATAGAAATGCAGATAACCTGAGCCTGTTC
AAGGCTATCGTTGCTGCATCCCTGTATCCGAACATCGCTACAGTCAGATGGACCAATCTA
AATAATTTCCGGAAGCAGCAAAGGATTTCAGCGTATACTCCAGAGGATGGGCGACTAGTT
ATACACCCGAGTAGCGTCATGGCGCCGCCAAAGAAAGGTCAAAACAGGGGCAAAGGCCCG
TGTCCCTCGCAGCTGTGTAATAACCCTGGCGCCAACTGGCTCGTGTATTGGCTTAAGCAG
AGATCGTCCGATCTCTTCCTACTTGACGTCACCTTAATTTACACGTTGCCTCTACTATTC
TTTGGTGAATTCCAAATAACTGATGATGTAGAAAACCCGGAGAAGTGTTTTGTGACGATA
TCAAACATCAAAGTATGTTGTAAAAGAGAATGCACTGACAAACTCCTCGAGCTAAGATAT
CTGTTGGATAAGGTTTTGGAGGCGAAGGTCAATGACTCCAATGCTGCATCCAGTAACAGT
GAATTTGAAGAATCTGTTTTGAAAACCGTTATTCAACTCATCACAGCAGAAGACGAGCAA
GCTGAATATTTAGGACACGAGTTTTCTGATTCCGATGCTTCGACTACCGATGATAGAAAT
TATTAA
Protein sequence:
MSRDFQNFSRPRGRGRNWDQSQRNHRTRPPGLRGAEIGLYYKELSMKKKKKEPVINLKIP
YSVLKALENELIAIRKIASTQNITLPTKLTQKCEKEQGEYNLTSKPGVSSRENFMDTNTK
DKCDSNSGQKQQSTRMYDYKYGYEDIITGSFDEKLDQCITKGITINTCDDEVESLNEAFF
IEYEDMLERNTYKNMLKFRKKLPAYIKAKELIKSINDNQVIVISGETGCGKSTQVPQIIL
DHAICSKKGAHTKILVTQPRRIAASSLAIRVAKERAEKLGNSVGYAVRLEKVDERSRGSI
QYCTTGILLAELEVNQGLTNYSHVILDEVHERDVHVDLSMCMLRKVLRKRKNLKLILMSA
TLDAESLSAYFDNCPLMHIEGLAYPVQDVYLEDILNLTNFTLPTERPKAPQAKWMKYRKK
NVSDAMETDIQYRAEIGNWLESKKKNLSLQTYKTLQDSRIEELSFELLVDLLIYICKGEP
GAILVFLPGIGDITKLMRMMESTNLFPANKYEIYPLHSRLPTLEQHKIFERPPDNIRKII
IATNIAETSITIDDVVYVVDSARIKMKGLNVEMNLSTLQTEWVSQANLRQRRGRAGRCQP
GICYHLLTSFRAEKLEERTLPELQRSDLLEPVLMIKRLRLGLAEDALKMVPSPPADSTIQ
SAVKHLQRCGALNTVETLTPLGWHLARLPVHPAAGKLLVLGALAGCLDRAASLAAVWGFK
EPFQMVIGKEYEVDMAKREFAMGEPSDHIAASEAIIQWENCPRRERSSFAYRNFLSNNTL
ELLVGMKNQFGDNLRQMGFLRSGNVRSKWENRNADNLSLFKAIVAASLYPNIATVRWTNL
NNFRKQQRISAYTPEDGRLVIHPSSVMAPPKKGQNRGKGPCPSQLCNNPGANWLVYWLKQ
RSSDLFLLDVTLIYTLPLLFFGEFQITDDVENPEKCFVTISNIKVCCKRECTDKLLELRY
LLDKVLEAKVNDSNAASSNSEFEESVLKTVIQLITAEDEQAEYLGHEFSDSDASTTDDRN
Y