| New model in OGS2.0 | DPOGS209725 |
|---|---|
| Genomic Position | scaffold2342:- 3264-5737 |
| See gene structure | |
| CDS Length | 1551 |
| Paired RNAseq reads | 210 |
| Single RNAseq reads | 500 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008939 (0.0) |
| Best Drosophila hit | CG18136 (1e-101) |
| Best Human hit | SET and MYND domain-containing protein 2 (5e-09) |
| Best NR hit (blastp) | GL21959 [Drosophila persimilis] (8e-114) |
| Best NR hit (blastx) | GI11814 [Drosophila mojavensis] (1e-112) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005737 cytoplasm GO:0016481 negative regulation of transcription GO:0005634 nucleus GO:0016564 transcription repressor activity |
| InterPro families | IPR001214 SET domain IPR002893 Zinc finger, MYND-type |
| Orthology group | MCL18325 |
Nucleotide sequence:
ATGGTATATTATTGTTCGAAGGAGCACCAAAAATTTGACTGGAAGAAGAGTCACAAGGTT
GAATGTAAACCATATAAAATCCAATATTCAGATTCCTGTGGGAGATTCATGACTGCAACA
AGAGATATAAAGCAAGGGGAAGTGATCTTAAAAGAAAAACCAGCGGTCATCGGGCCTAGA
ATGTATTGCAAAGTACAGTGCTTATCTTGTGGAAGACAATTACAACCAATACCTAACGAC
GATGGAAACATGGATTTTATAAGATGTTCTTCTTGTAACTGGCCAGTATGTGGCATTGAT
TGTGAAAAAGCTGAAGTACATAGAGAAGAATGTAAAATAATGGTTCAGAGTAAATACAAA
TGTGACATAAAATATGAATGTCCTGATAAAGCAGAAGCAGCTTATTGCGTCATTGCACCA
TTGAGAGTGCTATTAATGAAGGATTCAAATCCTCGTATGTTTGAAAGTATAATGAATTTA
GAGTCTCACGTTGATCAAAGAATAAATACCCCTATATATCAGGTATTAAGACCCAATTTA
ATTATGTTTATTAGACAAGTGCTTGGAATGAATTTTGATGATAAAATTATTTTGGAAATA
TCCTCCATATTTGATAATAATTCTTTTGATGTGAGAAGTGCAGATAAGACTAAAAGGTTA
CGAGCTATATATCTATTAGCTTCAATGATGAACCACAGCTGCAGGCCGAATACCCGACAT
ATATACCTAGGTGAAGACAAAACTCTAGCTCTAATAGCGACCGTTCATATTGCAAAAGGC
GAAGAAATTACTGCTACTTACACTCAGCCATTGTGGGGAACGTTGGATCGAAGAAAATTT
TTAAAAACCAATAAATATTTTGATTGTAAATGTGAGAGATGTGCTGACCCCACGGAATTC
GGCACATATTTAGGGAATATTTATTGTACGATGTGCAATAGTACGAATGCTGATGTTAGT
AGGAAAGGAGCCATGTTAGTGTCTACTAACCCTCTAGACGAAACTGCGCTGTGGAAATGT
GAAAACTGCGGATATTTTATTCAAGGGAGACAAATGGTATGGGGAAATAAGGCTTTAAAA
GAAGAATTAAGTTCATTAAATAAAACAGGGCCTCAAGATTTTGAACACTTCATTGAGAAA
TATAAGTTAACACTTCACCCCAGAAATCATTTATTGATTCAAGCTAAACTGGCGTTAATG
GAGATATATGGAAACTACAAAGGCTATTCTTTGAAAGAACTTCCGGAAAATTTGCTTAGT
CGGAAAATAGATATTTGCAACGAGCTCTTAGAAGTCGCTGAAAAGCTGGATCCTGGCTGG
TCCAGATTTCGTGGATCTATACTGTTGGAATTAGAAGCTGCGATGACCATAAAGATAAAA
AAAGAATTTGAAGCAGAAATGTTGACCAAAACGGAAGCACAGAACCAGTTGATAGAAAAT
ATGGTTCTACTTGAAGAAGCTACGAATATCTTGAAAATAGAACCTCACATGAACGAGGCT
CTCCAAACAAAACTTCAAGAACGTTTATCAATTTTGGATAACACGAAGTGA
Protein sequence:
MVYYCSKEHQKFDWKKSHKVECKPYKIQYSDSCGRFMTATRDIKQGEVILKEKPAVIGPR
MYCKVQCLSCGRQLQPIPNDDGNMDFIRCSSCNWPVCGIDCEKAEVHREECKIMVQSKYK
CDIKYECPDKAEAAYCVIAPLRVLLMKDSNPRMFESIMNLESHVDQRINTPIYQVLRPNL
IMFIRQVLGMNFDDKIILEISSIFDNNSFDVRSADKTKRLRAIYLLASMMNHSCRPNTRH
IYLGEDKTLALIATVHIAKGEEITATYTQPLWGTLDRRKFLKTNKYFDCKCERCADPTEF
GTYLGNIYCTMCNSTNADVSRKGAMLVSTNPLDETALWKCENCGYFIQGRQMVWGNKALK
EELSSLNKTGPQDFEHFIEKYKLTLHPRNHLLIQAKLALMEIYGNYKGYSLKELPENLLS
RKIDICNELLEVAEKLDPGWSRFRGSILLELEAAMTIKIKKEFEAEMLTKTEAQNQLIEN
MVLLEEATNILKIEPHMNEALQTKLQERLSILDNTK