New model in OGS2.0 | DPOGS209035  |
---|---|
Genomic Position | scaffold17:- 113836-119869 |
See gene structure | |
CDS Length | 1869 |
Paired RNAseq reads   | 17388 |
Single RNAseq reads   | 42253 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014211 (6e-171) |
Best Drosophila hit   | CG8036, isoform C (0.0) |
Best Human hit | transketolase (0.0) |
Best NR hit (blastp)   | transketolase [Bombyx mori] (0.0) |
Best NR hit (blastx)   | transketolase [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0004802 transketolase activity GO:0008152 metabolic process GO:0005811 lipid particle GO:0005875 microtubule associated complex GO:0031122 cytoplasmic microtubule organization |
InterPro families    | IPR015941 Transketolase-like, C-terminal IPR005475 Transketolase-like, pyrimidine-binding domain IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II IPR020826 Transketolase binding site IPR005474 Transketolase, N-terminal IPR005476 Transketolase, C-terminal |
Orthology group | MCL10675 |
Nucleotide sequence:
ATGAAGGGTGAAAAGAACGTTGATATACAAGCTTTAAAAGATATCGCCAATAAGCTGAGG
ATCGACAGCATCGTTGCTACAAATGCATCAAAATCCGGTCACCCCACGTCATGTGCGTCC
ATGGCGGAGATCATGTCCGTGCTGTTCTTCCACACTATGAGGTACAAGGTCTCCGCACCC
AAGGACCCCTCGGCCGACAGATTCATACTCTCTAAGGGTCACGCAGCGCCAATCCTATAC
GCCGCCTGGGCGGAGGCCGGCCTGTTCCCTCTGGACGACCTGAAGAACCTCCGCAAATTG
ACCTCCGACCTCGAGGGTCACCCCACGCCCAGGCTGAACTTCGTAGACGTCGGCACCGGC
TCGCTGGGTCAGGGGCTGGCGGTCGCCGCCGGTATGGCGTACGTCGGGAAATACTTCGAC
CAGGCGCCGTACAGGGTGTACTGTCTGGTGGGTGACGGCGAGGCGGCCGAGGGCAGTGTG
TGGGAGGCGCTGCACTTCGCAGGTCACTACAAGTTGGACAACCTGGTCGTGGTGTTCGAC
GTCAACCGCCTGGGACAGTCCGAGCCCACCTCGCTCCAGCATCAGATGGATGTGTACAAG
GCTCGCCTCCAAGCGTTCGGATCTCACACGCTGGTCGTGGACGGACATGACGTCACGGAG
CTCGTGAAGGCCTTCGACGAAGCCGCCAACACCAGCGGACGACCCACTGCCATCGTCGCC
AAGACATACAAAGGAAAAGGGTTCCCCGGGATAGAGGATAAGGACAACTGGCACGGGAAG
GCGCTAGGAGCTGACGGAGAGAAGATCATTAAGCACCTCCAGTCGCTGATGAAGTCCCAG
TCCGTATCGTTGAAGCCCCGGGCTCCGCTAGCGGCCGCGCCCCGGGTCCACCTGGAGGAC
CTTACGCTGTCCTCTCCGCCAGCATACAAGCTCGGGGAGCTGGTCGCCACCCGCCTGGCT
TACGGACACGGACTCAAGAAACTCGCCGACAATAACCAGAGAGTAATCGCCTTGGACGGG
GACACCAAGAACTCCACATTCAGTGACAAACTTCGTAACGCCTACCCCGACAGATATATC
GAATGTTTCATCGCGGAGCAGACGCTCGTGGGTGTGGCGACCGGCGCCGCGTGTCGAGAC
CGCGCCGTGGTGTTCGCCTCCACCTTCGCCGCCTTCTTCACTAGGACCTTCGACCAGATC
CGCATGGGCGCCATCAGTCAGAGCAACATGAACCTGGTGGGGTCTCACTGTGGCGTAAGC
ATCGGAGAGGACGGACCCTCGCAGATGGGGCTCGAGGACCTGGCCATGTTCCGCGCCGTT
CCCACCGCCACTGTCTTCTATCCCTCTGACGCGGTGAGCACGGAGCGCGCGGTGGAGCTG
GCGGCCGGCACGCGCGGCATCTGTTACATCCGCACCTCGAGACCGAACACGCCGGTTCTG
TACGAAAACGACGCCGTCTTCAAGGTGGGCGAGGCCCGCGTGGTGGTGCAGTCTGCCGCG
GACCAGGCGCTCGTCATCGGAGCAGGCGTCACCTTACACGAGGCGATGGCGGCCGTGGAG
TCTCTCCGGGCGGAAGGTGTGTCGGTGCGCGTGATGGATCCCTTCACCATCAAGCCGCTG
GACGAGGCGGCGGTGCGCGCGCACGCGGCGGCGGTCGGCGGACGAGTGGTGGTGGTCGAG
GATCACTACCAGGCCGGTGGTCTGGGCGAGGCGGTGATGTCGGCCCTGGCTCTGGTCCGA
GGGTCGGTGGTCCGTCACCTGTGTGTCCGCGAGGTTCCTCGCTCGGGCGCTCCTCAGGAG
CTGTTGGACCACTACGGCCTGTCCGCCAGACACGTGGCCGCCGCCATCAGGGAGATATTG
AAGGCTTAG
Protein sequence:
MKGEKNVDIQALKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKVSAP
KDPSADRFILSKGHAAPILYAAWAEAGLFPLDDLKNLRKLTSDLEGHPTPRLNFVDVGTG
SLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSVWEALHFAGHYKLDNLVVVFD
VNRLGQSEPTSLQHQMDVYKARLQAFGSHTLVVDGHDVTELVKAFDEAANTSGRPTAIVA
KTYKGKGFPGIEDKDNWHGKALGADGEKIIKHLQSLMKSQSVSLKPRAPLAAAPRVHLED
LTLSSPPAYKLGELVATRLAYGHGLKKLADNNQRVIALDGDTKNSTFSDKLRNAYPDRYI
ECFIAEQTLVGVATGAACRDRAVVFASTFAAFFTRTFDQIRMGAISQSNMNLVGSHCGVS
IGEDGPSQMGLEDLAMFRAVPTATVFYPSDAVSTERAVELAAGTRGICYIRTSRPNTPVL
YENDAVFKVGEARVVVQSAADQALVIGAGVTLHEAMAAVESLRAEGVSVRVMDPFTIKPL
DEAAVRAHAAAVGGRVVVVEDHYQAGGLGEAVMSALALVRGSVVRHLCVREVPRSGAPQE
LLDHYGLSARHVAAAIREILKA