New model in OGS2.0 | DPOGS209047  |
---|---|
Genomic Position | scaffold17:+ 39545-42917 |
See gene structure | |
CDS Length | 1143 |
Paired RNAseq reads   | 1258 |
Single RNAseq reads   | 3214 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009999 (9e-102) |
Best Drosophila hit   | Arp11 (3e-54) |
Best Human hit | actin-related protein 10 (3e-56) |
Best NR hit (blastp)   | actin-related protein 10 [Gallus gallus] (4e-75) |
Best NR hit (blastx)   | PREDICTED: similar to actin-related protein 10 homolog [Apis mellifera] (1e-60) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families   | IPR004000 Actin-like |
Orthology group | MCL13542 |
Nucleotide sequence:
ATGGCCCTTTACGAAGGGATCGCCCTTATTCAAGAAAAGCAAGCAGTGGTTTTGGATCTT
GGTCATGACTATACCAAATTCGGTTTTACGGGAGAGGCGGCGCCACGATGTATCATTCCC
TCAAGTTTTTGGAGCCCAGATGAAAAGTGTTATAAGAAAGTGTATGATTACAAAGATGAA
GATGAACTGTATGAAAACCTTGTACATATGCTGCATCTGCTGTATTTCAGACATGTTCTA
GTGAATCCTAAGGAGCGTAAAGTAGTAGTAGTGGAATCTCTCCTAACTCCTACACTCTTT
AGAGAGACTCTAGCCAAAGTGCTGTTCATGCATTATGAGGTGTCGGGTGTGATGTGGGCG
GACAGCGCTCGACTGTGTGCCCTCACACTGGGGACAAACATCACACTTGTTGTTAACATT
GGAGCACTTGAAGCTGAGGTTGTGGCTGTGGTCCACGGCAGTCCCGTCATCCACGCCATT
CAGAGCGGCCCGCTGGGAGCTCGCGCCGTGTCCACGGAGCTCGCCCGTCTCCTCGACGAA
CAGTACGGAGCTCCACTCCAACTGTCGGAACACGTCCTCGAGGACATCCGCGTGCGCGCC
TGTTTCGTGCCCGGCAGAGCACGTGCTCTCACCCTGGACGACCCGAGCACGGTGGGGGCG
CGCGGTGTCTCCGTCACCGGACCGGATCGAGTCCTCACCGTGGGCGGGAAAGCGCGCGAG
CGAGCTGCAGAGACGCTGTTCCTTAGAAACAACGAGTTGGCGTCGCTGCCCGATCTTGTG
CTCAAATGTATCCTCCAGTGTCCGATCGACGTACGGCGCGAGCTGGCCGCGAACATTCTG
GTGACGGGCGGCGGCGCGGCGCTCACCGGGCTCAAGGCGCGCTTGGCGGCGGAGCTGAGA
CACCTCGTCACCCTGACGCCCTACAGTGAGTCGCTGCACGGACTCCAGTTCTCGTTCCAC
TCTGCGCCGTCTCCGGACAGCACGGTGTCGTGGATGGGCGGGGCGCTGGCGGGCGCAGCG
GACAGCGGCTCTCGGGCGCTCCTCAAAGACGTGTACTCCCGGTCGCGGCGCCTGAGGGAC
TGGCCGTGCCTGCTACACACCACGCCGCCCGACCATCATCACTGGGCGGAGCTTCAATGC
TGA
Protein sequence:
MALYEGIALIQEKQAVVLDLGHDYTKFGFTGEAAPRCIIPSSFWSPDEKCYKKVYDYKDE
DELYENLVHMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFMHYEVSGVMWA
DSARLCALTLGTNITLVVNIGALEAEVVAVVHGSPVIHAIQSGPLGARAVSTELARLLDE
QYGAPLQLSEHVLEDIRVRACFVPGRARALTLDDPSTVGARGVSVTGPDRVLTVGGKARE
RAAETLFLRNNELASLPDLVLKCILQCPIDVRRELAANILVTGGGAALTGLKARLAAELR
HLVTLTPYSESLHGLQFSFHSAPSPDSTVSWMGGALAGAADSGSRALLKDVYSRSRRLRD
WPCLLHTTPPDHHHWAELQC