New model in OGS2.0 | DPOGS209048  |
---|---|
Genomic Position | scaffold17:+ 44527-46981 |
See gene structure | |
CDS Length | 1038 |
Paired RNAseq reads   | 851 |
Single RNAseq reads   | 2362 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010000 (2e-76) |
Best Drosophila hit   | small glutamine-rich tetratricopeptide containing protein (4e-29) |
Best Human hit | small glutamine-rich tetratricopeptide repeat-containing protein beta (3e-44) |
Best NR hit (blastp)   | PREDICTED: similar to secreted protein [Nasonia vitripennis] (2e-68) |
Best NR hit (blastx)   | PREDICTED: similar to small glutamine-rich tetratricopeptide repeat (TPR)-containing [Apis mellifera] (5e-53) |
GeneOntology terms    | GO:0005488 binding GO:0008150 biological_process GO:0005575 cellular_component |
InterPro families    | IPR011990 Tetratricopeptide-like helical IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing IPR001440 Tetratricopeptide TPR-1 IPR013105 Tetratricopeptide TPR2 |
Orthology group | MCL11763 |
Nucleotide sequence:
ATGTCAGAAATAAAAATAGTCGCGGCGAGCATAATAAATTTTTTAAAACAACAGCTCGAA
AGCGACTTGCTAAGTGCCGACTCGAGAGAGAGCGTGGAAGTTGGCGTACAATGCATTGAA
ACCGCATTCGAATTGACTCCAGAAGAACTATCCAAAGGCGTCGACCTTCTCCAGCTCGTG
AAAAAACAGCGAGGAGGGGCGACTCCGGCCGATCGTGTAGAAGCTGAAAAACTAAAAAAC
GAAGGTAACGAATTCATGAAAGCCGAGCGTCACAAGGAAGCCCTGGAAAAGTATAGCCGT
GCCATCGAACTTGATCCTCAGAACTCGGTTTTCTTCTGCAACCGAGCAGCAGCACATTTC
AAACTCGGGGAACACGAGTCCGCCGTAGCCGACGCCATGGCTGCCTTAGCGCTGCAACCC
AATTACGGTAAGGCCTACGGACGACTGGGAATCGCTCTCACGGCGCTCGACAGGCACACG
GAGGCACGCAACGCCTTCGCCCGCGCCGTGCAGCTGGAACCGGACAACGATAGTTACAAG
GAGAACCTCAAGATGGCGGAGGAAAGACTGGCCGAGCGCGGGGAACGACCGCCGCTCGAC
TTGGGCGGGCTGCTGCAGAACCCGGCGCTCCTCAACATGGCCACCGAGATGCTCTCGGAT
CCGAACATGCAGCATCTCATCTCGGGTCTGATGACGGCCAACACTGCGGGGGCCGGGGGC
GGCTTGGGCGGCCTGCTCGGCTCGGACGCCGCACTGGCCCCGTCGCTGCTGGAGGCGGGC
CAGGCCCTGGCGCAACAGATGCAGGCCGCAAACCCGGAGCTCGTGGAGCAGCTAAGGAGA
CAAGTGCGTCCGCCCGGGGCGCCCGGCAACCAGCCGCCACACCCACATAAGCAGAAGACA
GACGCCGCAGTGCAATACAAAACATCATCAAAATACCATATTTACATACAGACCCTCGCG
CTCGAGCCCGCAGCCCCCGGGGCACTAGCGGAGCCCTACACGGTACACCTTCTACATAAC
AAGCCGTCCCTAGTATAA
Protein sequence:
MSEIKIVAASIINFLKQQLESDLLSADSRESVEVGVQCIETAFELTPEELSKGVDLLQLV
KKQRGGATPADRVEAEKLKNEGNEFMKAERHKEALEKYSRAIELDPQNSVFFCNRAAAHF
KLGEHESAVADAMAALALQPNYGKAYGRLGIALTALDRHTEARNAFARAVQLEPDNDSYK
ENLKMAEERLAERGERPPLDLGGLLQNPALLNMATEMLSDPNMQHLISGLMTANTAGAGG
GLGGLLGSDAALAPSLLEAGQALAQQMQAANPELVEQLRRQVRPPGAPGNQPPHPHKQKT
DAAVQYKTSSKYHIYIQTLALEPAAPGALAEPYTVHLLHNKPSLV