DPGLEAN13905 in OGS1.0

New model in OGS2.0DPOGS209060 
Genomic Positionscaffold17:+ 199369-200905
See gene structure
CDS Length855
Paired RNAseq reads  7
Single RNAseq reads  74
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006116 (1e-64)
Best Drosophila hit  vismay, isoform B (3e-38)
Best Human hithomeobox protein TGIF2 (2e-28)
Best NR hit (blastp)  achintya [Bombyx mori] (1e-70)
Best NR hit (blastx)  achintya [Bombyx mori] (1e-63)
GeneOntology terms







  
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005634 nucleus
GO:0003714 transcription corepressor activity
GO:0042826 histone deacetylase binding
GO:0007283 spermatogenesis
GO:0045941 positive regulation of transcription
GO:0016563 transcription activator activity
GO:0043565 sequence-specific DNA binding
GO:0006355 regulation of transcription, DNA-dependent
InterPro families


  
IPR012287 Homeodomain-related
IPR001356 Homeobox
IPR009057 Homeodomain-like
IPR008422 Homeobox KN domain
Orthology groupMCL24201

Nucleotide sequence:

ATGAAGATCAAATTACCAAGAGATCGTTTTCCCTCAACTTCTTCGACGGAAGACAACGAG
AGTGTCAACGATTGGGCGGATGTGCGGCCGGTGCTGCAGCCCCGCCTGCCGCCGCCGCAG
GCCATCATAGTGGGGTCTGTGAGGAAGCGACGCGGGAACCTGCCTAAGAACTCCGTCAGG
ATACTGAAGAGGTGGCTGTACGACCATCGATACAACGCCTACCCCAGCGACGCTGAGAAA
CTCGCCTTGAGCCAAGAGGCCAATCTCACCGTGCTACAGGTGTGCAATTGGTTCATAAAC
GCCCGCCGCCGCATTCTGCCGGAGATGATCCGTCGCGAGGGCCACGACCCTTTACAGTAC
ACAATATCTCGCCGCGGTCGCAAACAGCCGGGCCTGGGAGTGGGTCCCGTGGGGATGGTG
TCGGCCTCCACCTCCACCATGAGCGTGATGCCCGGGAACGTGACCGTCGCTGGATGGGAG
GGAGTCGAGGTTCAGAACATAGAACAGCCGCGCGGACACGACTACGGAGACGGTCTGCTG
GTGTACCGCGAGGGGGACGAGCTGGGGGACGGGGAGGAGGGGTACTCTAGTGCCGTCAGC
GAGGAGGAGGTGAAGTACGACCCATCGGTCTGGCAGTCCGTTATACGGTACGGACCAGAG
GAACAGGACCTACATCATATTAATAGAGGTTCGTCGGTGGTGAGCATGTCGACTGATGGT
ATGGAGCTGGTGGAGAGCGAGGGAGGGTGGCAGGCGCCGGCGCCGCTGGCCGCGAGGAGG
CAGGTGAGCTCTCCGCCGCCGCCCGTGGCCGTGGAGCTGGAGGTGGCCACCACGGACATG
TGGTGCCACACTTAG

Protein sequence:

MKIKLPRDRFPSTSSTEDNESVNDWADVRPVLQPRLPPPQAIIVGSVRKRRGNLPKNSVR
ILKRWLYDHRYNAYPSDAEKLALSQEANLTVLQVCNWFINARRRILPEMIRREGHDPLQY
TISRRGRKQPGLGVGPVGMVSASTSTMSVMPGNVTVAGWEGVEVQNIEQPRGHDYGDGLL
VYREGDELGDGEEGYSSAVSEEEVKYDPSVWQSVIRYGPEEQDLHHINRGSSVVSMSTDG
MELVESEGGWQAPAPLAARRQVSSPPPPVAVELEVATTDMWCHT