| New model in OGS2.0 | DPOGS201696 |
|---|---|
| Genomic Position | scaffold1300:- 25135-29378 |
| See gene structure | |
| CDS Length | 1122 |
| Paired RNAseq reads | 3277 |
| Single RNAseq reads | 7969 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010794 (0.0) |
| Best Drosophila hit | Rpt4 (0.0) |
| Best Human hit | 26S protease regulatory subunit 10B (0.0) |
| Best NR hit (blastp) | 26S proteasome regulatory ATPase subunit 10B [Bombyx mori] (0.0) |
| Best NR hit (blastx) | 26S proteasome regulatory ATPase subunit 10B [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0008540 proteasome regulatory particle, base subcomplex GO:0016887 ATPase activity GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0004175 endopeptidase activity GO:0030163 protein catabolic process GO:0005524 ATP binding GO:0005737 cytoplasm GO:0005875 microtubule associated complex |
| InterPro families | IPR003960 ATPase, AAA-type, conserved site IPR003593 ATPase, AAA+ type, core IPR005937 26S proteasome subunit P45 IPR003959 ATPase, AAA-type, core |
| Orthology group | MCL12051 |
Nucleotide sequence:
ATGGAACACAAAGAAGTGGAATCAAGGCTTAAAGATATGCGCGAACAGTTGAAAGACCTC
ACCAAACAGTACGACAAAAGTGAGAATGATCTAAAAGCACTGCAAAGTGTTGGCCAGATA
GTTGGAGAAGTCCTGAAGCAGCTGACTGAGGAGAAATTCATTGTAAAAGCTACAAATGGT
CCTCGTTATGTTGTTGGTTGTCGTCGTCAGCTTGACAAGAATAGGTTGAAAGGTGGAACT
CGAGTTGCTCTAGATATGACAACGCTAACTATAATGAGACATCTGCCGAGGGAGGTGGAT
CCCTTAGTATACAACATGAGTCACGAAGATCCCGGTGACGTGACATATTCAGCTATTGGT
GGTCTCCAAGAACAGATACGACAGTTGAGAGAGGTTATAGAGTTACCTCTGATGAATCCC
GAGCTGTTTGTCCGTGTTGGCATCACACCTCCCAAGGGTTGCCTCCTGTATGGACCACCT
GGTACCGGAAAGACACTACTCGCTAGGGCTGTCGCTTCTCAATTAGACGCTAACTTCCTC
AAGGTGGTGTCCTCGGCTATTGTTGATAAATATATCGGAGAATCAGCTCGTCTCATCCGT
GAGATGTTCAACTATGCTCGTGACCACCAACCGTGTATCATATTTATGGATGAAATTGAT
GCTATCGGTGGGAGACGTTTCTCCGAAGGGACGAGCGCCGATAGAGAGATACAAAGAACC
CTCATGGAACTCCTGAACCAGATGGACGGGTTTGATTCGTTGGGTCAAGTCAAGATCATT
ATGGCGACCAACCGACCAGATACATTGGACCCAGCACTGCTTAGACCCGGGAGACTTGAT
AGGAAGATCGAGATACCACTCCCAAATGAACAGGCTCGACTAGAAATCCTCAAGATCCAT
GCTTCCCCAATCGCCAAGCACGGTGAGATGGACTATGAAGCAGTGGTGAAATTATCAGAT
GCATTCAACGGGGCTGATCTCAGGAATGTCTGCACCGAGGCCGGGCTGTTTGCTATACGA
GCCGAGAGGGAATACATCATACAGGAGGATCTCATGAAAGCGGTTCGTAAGGTCGCCGAC
AACAAGAAGCTAGAAAGCAAGCTTGATTATAAGCCCGTCTAA
Protein sequence:
MEHKEVESRLKDMREQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNG
PRYVVGCRRQLDKNRLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIG
GLQEQIRQLREVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFL
KVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRT
LMELLNQMDGFDSLGQVKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIH
ASPIAKHGEMDYEAVVKLSDAFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVAD
NKKLESKLDYKPV