New model in OGS2.0 | DPOGS212576  |
---|---|
Genomic Position | scaffold9:+ 195986-199788 |
See gene structure | |
CDS Length | 984 |
Paired RNAseq reads   | 2182 |
Single RNAseq reads   | 6854 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012309 (8e-139) |
Best Drosophila hit   | CG6287 (7e-91) |
Best Human hit | D-3-phosphoglycerate dehydrogenase (4e-83) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP008849-PA isoform 1 [Tribolium castaneum] (1e-110) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP008849-PA isoform 1 [Tribolium castaneum] (1e-98) |
GeneOntology terms    | GO:0004617 phosphoglycerate dehydrogenase activity GO:0051287 NAD or NADH binding GO:0006564 L-serine biosynthetic process GO:0055114 oxidation reduction |
InterPro families    | IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding IPR016040 NAD(P)-binding domain IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPR006236 D-3-phosphoglycerate dehydrogenase |
Orthology group | MCL13440 |
Nucleotide sequence:
ATGGGTCTCGATATAAAGTCTGTACTGATTGTGGATGGTGTTGGGTCGAACTGCGCAGAT
ATTCTCAACTCACACAATATTCAAGTCACTACAAAAGCAAAGATATCGAAAGATGAACTC
CTCAAAGAAATATCTAACCATGATGCACTGGTGGTGCGCTCTGCAAGTCAGGTCACTAAG
GAAGTGCTAGAGGCGGGAAAAAAACTTAAAGTAGTTGGAAGAGCTGGAGCTGGAGTTGAT
AACATTGACGTGGCCGCTGCTGGTAGCAGAGGAATCGGTGTTATTAACGCACCTGGAGCG
AACGCAATGAGTGCGTGTGAATTGACTTGCGGTTTGATACTGGCTCTGGCACGCCACGTA
GTGCCAGCAGCTGCGGCCCTCAGGGCCGGAAAGTGGGAACGCACTCAGCACACCGGCACT
GAACTCAACGGGAAAACATTAGCTATCCTGGGCTTAGGAAGAGTAGGGAGGGAAGTGGCT
ATCCGCATGAATGCGTTTGGCATGAAGGTAATTGGTTTTGATCCGTTCGTAACATCGGAG
CAATGCGAACAGTTCCACACATCAAAGATGGAATTAGATGAGATTTGGCCTCTTGCTGAC
TACATTACTCTTCACACGCCACTCATTGAATCTACCCGTAATTTTATTAACTCAAATAGT
TTGAAGCGCTGTAAAAAAGGTGTGAAGATCATAAATGTTGGACGTGGAGGTCTAATTAAT
GAAAAGGACTTCCTCGAAGCCCTTCAATCTCAACAGGTTGGAGGAGCAGCTCTTGATGTA
TTTGAACAGGAACCTCCGACTGATCCGCTTACATTAGAGATCATTAAACATCCAGCCGTG
GTCGCTACGCCTCATTTAGGTGCTTCTACTAAAGAAGCTCAAGTACGTGTGGGACAAGAA
ATTGCAGAACAACTGGTCAACCTAGTCAAACCAGGAACATATTCAACTCCGCTCGCAGAA
GTTACGCGTGTACTCTCTAAGTAA
Protein sequence:
MGLDIKSVLIVDGVGSNCADILNSHNIQVTTKAKISKDELLKEISNHDALVVRSASQVTK
EVLEAGKKLKVVGRAGAGVDNIDVAAAGSRGIGVINAPGANAMSACELTCGLILALARHV
VPAAAALRAGKWERTQHTGTELNGKTLAILGLGRVGREVAIRMNAFGMKVIGFDPFVTSE
QCEQFHTSKMELDEIWPLADYITLHTPLIESTRNFINSNSLKRCKKGVKIINVGRGGLIN
EKDFLEALQSQQVGGAALDVFEQEPPTDPLTLEIIKHPAVVATPHLGASTKEAQVRVGQE
IAEQLVNLVKPGTYSTPLAEVTRVLSK