| New model in OGS2.0 | DPOGS212526 |
|---|---|
| Genomic Position | scaffold3564:+ 10686-14559 |
| See gene structure | |
| CDS Length | 849 |
| Paired RNAseq reads | 380 |
| Single RNAseq reads | 1442 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009796 (2e-116) |
| Best Drosophila hit | orange (1e-92) |
| Best Human hit | AP-3 complex subunit sigma-1 (6e-80) |
| Best NR hit (blastp) | AGAP007522-PA [Anopheles gambiae str. PEST] (3e-100) |
| Best NR hit (blastx) | AGAP007522-PA [Anopheles gambiae str. PEST] (1e-95) |
| GeneOntology terms | GO:0006727 ommochrome biosynthetic process GO:0016183 synaptic vesicle coating GO:0006901 vesicle coating GO:0030135 coated vesicle GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0006726 eye pigment biosynthetic process GO:0007040 lysosome organization GO:0046907 intracellular transport GO:0006886 intracellular protein transport GO:0030117 membrane coat GO:0005515 protein binding GO:0016192 vesicle-mediated transport GO:0008565 protein transporter activity GO:0048072 compound eye pigmentation |
| InterPro families | IPR000804 Clathrin adaptor complex, small chain IPR011012 Longin-like IPR022775 AP complex, mu/sigma subunit IPR016635 Adaptor protein complex, sigma subunit |
| Orthology group | MCL11892 |
Nucleotide sequence:
ATGATAAAAGCTATTTTAGTTTTTAATAATCATGGCAAGCCGAGATTATCAAAATTCTAT
CAGTACTTTAATGAAGATATGCAACAACAGATAATAAAAGAAACGTTTCAATTAGTGTCG
AAAAGAGATGACAATGTGTGCAATTTTCTGGAAGGTGGCAGTCTCATCGGTGGGTCAGAC
TACAAATTAATATACAGACACTATGCGACACTATACTTTGTGTTCTGCGTCGATTCCTCG
GAGAGTGAGCTGGGAATACTGGATCTCATACAGGTGTTTGTTGAAACCCTGGACAAATGC
TTCGAGAATGTCTGCGAGTTAGACCTGATCTTCCACGCGGATGCTGCACACCAGGTATTG
GACGAGCTGGTCATGGGAGGGATGGTGCTCCAGACTAATATGGCAGATATATTATGCAGG
CTCGCCGAACAAAACAAAATGCAGAAAGCTGAGGCTGGTATATCCGCGGCTCCGGCCAGG
GCCGTGTCTGCTGTCAAGAGTATGAATCTACCACAGCAGCTGAGGGACATTAGACTGCCC
GACCTTCCGCAGGCCATCAAGGCGTATCCCGCCACAGTAACAATAGCCAGCAACATATTC
AACTCAATATACACCAACGACAAATATCAAAACATACAGAGAGACAACATCACTAATAAG
TTCTTTGGCTCGGAATCCCTCAGTCACAAGTTCTCTGAGACCTTCACAGAGAATTACCAA
CAGACGGACGGAATAAACTTCCCAAATTATGAGACTAATTATGACAGAGAGAGGGCAGTG
TATCAAGACCTCAGCGGCACAGTAGAGAGCAAACACAAGGACAAGAAGAGAAAGAAGAAG
AATAAGTAA
Protein sequence:
MIKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSD
YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAAHQVL
DELVMGGMVLQTNMADILCRLAEQNKMQKAEAGISAAPARAVSAVKSMNLPQQLRDIRLP
DLPQAIKAYPATVTIASNIFNSIYTNDKYQNIQRDNITNKFFGSESLSHKFSETFTENYQ
QTDGINFPNYETNYDRERAVYQDLSGTVESKHKDKKRKKKNK