| New model in OGS2.0 | DPOGS213651 |
|---|---|
| Genomic Position | scaffold218:- 165761-168845 |
| See gene structure | |
| CDS Length | 1539 |
| Paired RNAseq reads | 93 |
| Single RNAseq reads | 289 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001685 (9e-11) |
| Best Drosophila hit | combgap, isoform C (3e-24) |
| Best Human hit | endothelial zinc finger protein induced by tumor necrosis factor alpha (9e-34) |
| Best NR hit (blastp) | krueppel c2h2-type zinc finger protein, putative [Pediculus humanus corporis] (1e-45) |
| Best NR hit (blastx) | krueppel c2h2-type zinc finger protein, putative [Pediculus humanus corporis] (1e-50) |
| GeneOntology terms | GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005730 nucleolus GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGTGTGAATGCAAGTGTAGATTGTGTTTAAAGGTATCATCTAATATTGTGGAAGAATTG
TGGGAAGGATGTAAAATTTTGGAACAATTGTTTACCTGTCTGGGGCACCATGTAGTAATA
AACAAAGATCTACCTAACAAAATATGCAATAATTGTGTCATGAAAATAGAAGATATATAC
AAATATCAACAATTTATCAGACAAAATGAAATAAAATTACAACAAGAATTAAATAATATT
ATAATTCATAGTGAAATTGTTAATATCAATGAAGTAAAAATAGAAGATCAAATATTAGAT
GAAGAAAAATCTATAGATCAAGAGAAAAATGTTAAAATTAAATCAGAAATTACTGAAGAA
AATGTAAAAAATATAACAGAATTACATGGAGAAGTAATTCAGAAAAATGATGTTGAATTA
TATCCAGTCAAACAAGAAATTGAAAACAAAATTGTTTATAGTAATGAAGACAAAGATATT
AATAAAGAAATATCAAATGCAATTAAACTAGACGAAACAAAGAGATTTTCATGTTTAACA
TGCTTTGAAGTATTCCCAAATCAATTGGAACTCTTAAGGCACTACCAGAATGTTGAATTA
GAAAAATATAACAAGAATAATACAGATGTTGAAAGTAAACCTGTAAAGTACAACGTGTTC
ACAGACGATAATGGTTTATATTACAAATGTGAGAGGTGTTACAAAAAGTACCGACAGAAA
TCATACATAAACAGACATGTATTGAGTCACATAGAAAGAAGACCATTCCTCTGCAAGCTG
TGCGGTAAAACTTACCAAACAGCATCAATAATAGTTTCCCATGGAAAGATACACACGGGA
GATATATATGCATGTACATACAACTGTGGCTACCGATCTGTACACAAACATGTTGTCAAA
AATCATGAGAAAAGACACAAAGGAGAATTTAAGTATAAATGCCAGACATGCGGCAAAGGA
TTCCAAGTGAGATCATGGTACCAACAGCATCAGAACATTCATGATGGAGTCAAGCCATTC
AAATGCGATATCTGTGGCATGAGTTTTCATCTGCATCGATATCTAACTACACATCGAAGC
AATGTACACCCACAGTCGTCTGTTCGCAAACCGTGGGTTTGCAAGCAATGTGAATATCCC
TGTGACTCCAAAAATAGTCTAAATTTGCATTTGAAGGATAAACATGGCCTAGTTATAAAG
AAATCAAACTTGTGTGATGTTTGTGGTAAAGTCTTGAAGGATTCCCAACAGTTGAAAGTA
CACAAGAGAGCCGTACACTTGAACATCAAGCCGTATGTCTGTGGTACATGTAACAAGTCG
TTCCCCAAAAAATATACTCTCAAGAACCACGAACAGACACACAAAGGAAAGACGTTTTTA
TGTTCCATGTGTGACAAGATGTTCGCTAAAGACGCCAGTCTACAGAAACACGTACAAAGG
TGTCATATAACAAGCAAGTACAGGTGTCACGAATGTGACAAATCATTTTCATCAAAGATG
ACATTGACAGTTCACGTGAAGAATTGCAACCGGAAGTGA
Protein sequence:
MCECKCRLCLKVSSNIVEELWEGCKILEQLFTCLGHHVVINKDLPNKICNNCVMKIEDIY
KYQQFIRQNEIKLQQELNNIIIHSEIVNINEVKIEDQILDEEKSIDQEKNVKIKSEITEE
NVKNITELHGEVIQKNDVELYPVKQEIENKIVYSNEDKDINKEISNAIKLDETKRFSCLT
CFEVFPNQLELLRHYQNVELEKYNKNNTDVESKPVKYNVFTDDNGLYYKCERCYKKYRQK
SYINRHVLSHIERRPFLCKLCGKTYQTASIIVSHGKIHTGDIYACTYNCGYRSVHKHVVK
NHEKRHKGEFKYKCQTCGKGFQVRSWYQQHQNIHDGVKPFKCDICGMSFHLHRYLTTHRS
NVHPQSSVRKPWVCKQCEYPCDSKNSLNLHLKDKHGLVIKKSNLCDVCGKVLKDSQQLKV
HKRAVHLNIKPYVCGTCNKSFPKKYTLKNHEQTHKGKTFLCSMCDKMFAKDASLQKHVQR
CHITSKYRCHECDKSFSSKMTLTVHVKNCNRK