| New model in OGS2.0 | DPOGS213653 |
|---|---|
| Genomic Position | scaffold218:- 140700-144508 |
| See gene structure | |
| CDS Length | 1824 |
| Paired RNAseq reads | 396 |
| Single RNAseq reads | 942 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004570 (0.0) |
| Best Drosophila hit | CG1732, isoform A (0.0) |
| Best Human hit | sodium- and chloride-dependent GABA transporter 1 (0.0) |
| Best NR hit (blastp) | high affinity GABA transporter [Trichoplusia ni] (0.0) |
| Best NR hit (blastx) | high affinity GABA transporter [Trichoplusia ni] (0.0) |
| GeneOntology terms | GO:0005332 gamma-aminobutyric acid:sodium symporter activity GO:0005328 neurotransmitter:sodium symporter activity GO:0005887 integral to plasma membrane GO:0006836 neurotransmitter transport GO:0005886 plasma membrane |
| InterPro families | IPR000175 Sodium:neurotransmitter symporter |
| Orthology group | MCL10288 |
Nucleotide sequence:
ATGGATTCAAAGAGTGACGGTCGCTGCGATGACATCGAGCTCAGCGTTCAAGGAGTCGGT
AGTAAACCTGGCGTCGGGGCAACTAAATCTGACCTTCCGGAACGAGGTTCTTGGGGCAGC
AAGTTAGACTTCATCCTTTCAGTCATCGGACTGGCTATCGGGTTAGGCAATGTCTGGCGC
TTCCCTTACCTCTGCTACAAGAATGGTGGCGGCGCCTTCCTTATTCCGTACTTCCTCACC
CTCTTCCTTGCCGGGATTCCGATGTTCTTCATGGAACTTGCTATGGGACAGATGCTTACG
ATTGGTGGCTTGGGAGTTTTCAAAATAGCGCCCATTTTTAAAGGGATCGGTTACGCCGCA
GCAGTGATGTCGTGCTGGATGAACGTGTACTACATAGTCATCTTAGCGTGGGCCATCTTC
TATTTCTTTATGTCAATGAGATCTGACGTTCCGTGGAGGACTTGCGACAACTACTGGAAC
ACGGAGACTTGTGTGAATCCATATGACAGGAAGAACCTGACTTGCTGGTCCGACTTCGAT
ATGAACACCTTCTGCACACTCAACGGCAAGAATGTCAGTAAGGCATTCCTCTCTGATCCT
GTTAAAGAATTTTGGGAACGTCGCGCTCTCCAAATATCCAGCGGCATAGAACACATTGGC
AACATCCGCTGGGAGCTGGCGGGCACGCTGCTGCTGGTGTGGGTGCTCTGCTACTTCTGC
ATCTGGAAAGGAGTTCGTTGGACCGGCAAAGTCGTTTACTTCACTGCGCTGTTCCCATAC
TTTTTGCTGACCGTACTGCTTATTAGGGGTATCACTCTACCGGGAGCGTTTGAGGGCATA
AAGTTCTACGTGATGCCGAACATGTCGAAGCTTCTTGAATCCGAAGTGTGGATAGATGCT
GTAACTCAGATTTTCTTCTCGTATGGTCTCGGTCTCGGCACTCTCGTCGCGTTGGGAAGT
TATAATAAGTTCACCAATAATGTATACAAAGATGCTCTGATAGTCTGCTCAGTCAACTCC
AGTACATCAATGTTCGCTGGTTTCGTCATATTCTCGGTGGTGGGCTTCATGGCTCACGAG
CAACAAAGACCTGTAGCTGAAGTCGCCGCATCAGGGCCGGGTCTAGCGTTCTTGGCGTAT
CCGTCGGCGGTCCTCCAGCTCCCCGGGGCGTCTCTGTGGTCGTGTCTGTTCTTCTTCATG
TTGCTGCTCATCGGCTTGGACAGTCAGTTCTGTACTATGGAAGGCTTCATCACCGCCGTC
ATCGACGAGTGGCCGAAACTATTGAGGCGTAGGAAGGAAATATTCATTGCGATCACCTGC
ATCATATCTTATTTGGTTGGATTGTCTTGCATATCTGAGGGAGGAATGTACGTTTTCCAA
ATACTAGACTCGTACGCCGTGTCCGGTTTCTGTCTGCTGTTTTTGATCTTCTTCGAATGC
GTGTCCATCTCGTGGGCGTTTGGTGTGAACCGGTTCTACGACGGGATAAAGGAGATGATT
GGATACTACCCAACCATTTGGTGGAAATTCTGCTGGGTTGGATTCACGCCCGCTATATGC
ATAAGCGTGTTTATCTTCAACCTGGTCCAATGGAAGCCCATCAAGTACATGAACTACGAG
TACCCCTGGTGGTCGCACGTCCTCGGCTGGTTCACGGCGCTCTCCTCCATGTTGTGTATC
CCGGGCTACATGCTGTACCTCTGGAGGGTTACCCCGGGGACAAATATGGAGAAATTCCAC
AAGATAGTTCGCATCCCGGAGGACGTTCCTACTCTCCGTACTAAGATGCAAGCCGAGGAA
CAAGCCAAACACGCTAGCGCTTAA
Protein sequence:
MDSKSDGRCDDIELSVQGVGSKPGVGATKSDLPERGSWGSKLDFILSVIGLAIGLGNVWR
FPYLCYKNGGGAFLIPYFLTLFLAGIPMFFMELAMGQMLTIGGLGVFKIAPIFKGIGYAA
AVMSCWMNVYYIVILAWAIFYFFMSMRSDVPWRTCDNYWNTETCVNPYDRKNLTCWSDFD
MNTFCTLNGKNVSKAFLSDPVKEFWERRALQISSGIEHIGNIRWELAGTLLLVWVLCYFC
IWKGVRWTGKVVYFTALFPYFLLTVLLIRGITLPGAFEGIKFYVMPNMSKLLESEVWIDA
VTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCSVNSSTSMFAGFVIFSVVGFMAHE
QQRPVAEVAASGPGLAFLAYPSAVLQLPGASLWSCLFFFMLLLIGLDSQFCTMEGFITAV
IDEWPKLLRRRKEIFIAITCIISYLVGLSCISEGGMYVFQILDSYAVSGFCLLFLIFFEC
VSISWAFGVNRFYDGIKEMIGYYPTIWWKFCWVGFTPAICISVFIFNLVQWKPIKYMNYE
YPWWSHVLGWFTALSSMLCIPGYMLYLWRVTPGTNMEKFHKIVRIPEDVPTLRTKMQAEE
QAKHASA