New model in OGS2.0 | DPOGS212221  |
---|---|
Genomic Position | scaffold959:+ 16124-22714 |
See gene structure | |
CDS Length | 2139 |
Paired RNAseq reads   | 1045 |
Single RNAseq reads   | 2471 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004408 (0.0) |
Best Drosophila hit   | CG6133 (0.0) |
Best Human hit | tRNA (cytosine-5-)-methyltransferase NSUN2 isoform 2 (2e-132) |
Best NR hit (blastp)   | PREDICTED: similar to CG6133-PA [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG6133-PA [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0003886 DNA (cytosine-5-)-methyltransferase activity GO:0003723 RNA binding |
InterPro families    | IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IPR023267 RNA (C5-cytosine) methyltransferase IPR023270 RNA (C5-cytosine) methyltransferase, NCL1 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p |
Orthology group | MCL14539 |
Nucleotide sequence:
ATGGGTAGACGAAACAGAAATGTTAATAAATTCGCACAACGCAAAAGAGAACGGAAAGAA
CAGGAAAAAAATCCACAACAGAAACCGGCCGACACGCGAAAGCATTATGAAGATATTGTG
CGTGAAAATGCAATCTTCGAAGAGTATTATAAGGCGCAGAAAGTTTGTCCTGATGATCAA
TGGGACGACTTCATGAGAGCTATCAAGAAAGATCTGCCAACAGCATTCAGAATAACGGGC
TCCAAATGTGAAACAGATGCGCTACTCAATATAGTTAAGAGCCAATATTTTTCAGAGATA
TTAAATCATAAACTTAAATTGGATGATGAGAAAGAAGAAGAGGAAATCAAACCTGTTAAC
TTGCCGTGGTATCCCGGAGGTCTAGTGTGGCAACTGCCAGTATCTCGCACACATATCCGT
CGGAATGAACCACTCTATCGTCTCCATAACTTTTTAGTGGCTGAAACAGAAGCGGGCGGT
GTTTCACGTCAAGAGGCTGTATCTATGATACCGCCTGTTGTGTTACAAGTTGAACCTCAT
CATAAGGTATTAGACATGTGTGCTGCACCGGGCTCCAAGACTGCACAACTCATTGAGTTC
TTACATTCTGATGAAGACAAAATGCCTACAGGTTTCGTAATGGCCAATGATGTTGACAAC
AGTCGCTGTTACATGTTGGTGCACCAGGCGAAGAGGTTGAACTCACCCTGCATCATCATC
ACCAACCATGACTCCGCAGTGTTGCCATCACTGGTTGTGAGTGATGAGGAGAACCCGAGT
GCGACGAAGCCGCTTAAGTTCGACCGCGTTCTGTGTGATGTTCCATGTTCCGGAGACGCC
ACCTTGAGGAAGAACCCTGATATATGGACGAAATGGTCGACCGGAAACGGAAATAACTTA
CACGGTATTCAGTATAGAATCCTCCGTCGTGGCGTTGAGTTGTTGTCTGTGGGCGGAAGA
TTGGTCTATTCCACCTGTTCCTTCAACCCTGTGGAGAACGAGGCCGTGGTGCACAGAATC
CTTCAGGAGACCGGCGCCAGTGTGACCCTCGTGGATGTACAGGATCTACTGCCCGGACTA
AAGTTCCATAAAGGCATGACACATTGGCGGCCGGCGTCTAAAGACATGGTGTTCTACAAC
AGTTATGATGAGGTTCCAGAGAAATGGCAGACGGTGGTGAGGCCGCAAATGTTCCCTCCC
AAGACTGAAGACTTGGACAAATATAATCTGGATAGATGCATAAGAATTCTGCCTCATCAC
CAAGATACTGGAGGGTTTTTCGTGGCAGTGTTTGAAAAAACCGCCCTCCTGCCATGGGAG
AAGGACCCAACCAAGAAACCGGATGTGGCAGCCGATGAACCGGCAGAGGAACCGGAAAAG
AAGGAACCACCAAAGAAGAGAAGAAGAATGGGAGGATATAGGGAGGATCCTTTTGTATTT
TTCTCCGGTGAAAATGAAGATGTGTTCCCTTCTATCAAGGAATTCTACGATCTTGATACA
AAATTCGACCCTACCTGTCTCTTGACGAGATGTCATGTTGGGAAAAAGAAGAATATTTAC
CTGGTGTCAGCCATGGTGAAAGAAGTTGTACAGAAAAATGAGAATAGTATTAAGATTATA
AACACAGGCGTCAAAACATTTGTTAGGTGTGATAATAAAAATATGAAGTGCCCATTCAGA
CTATCTCAAGAAGGTCTTCAGAGTATAGCCCAGTACATCGGTCCAAAACGACGCGTGACC
ATTCTTAAGGAGGATCTCATACTAATATTACAATGTGACAACCCTAGCAAACCCCCAGAA
CTAAAACTGTTCACAGAACACACTCAGAATATGGTGAAAGATTTCGCTACTGGTAGCTGC
GTGTTGGAGTATAAGGACACGTCATCAGGGTTGTCACTCCGCCTGGTCGGTTGGCGAGGT
GTTCACTCTCTACGCGCGTACACCGCCGCCCCTGACACCGTGCACTACCTAAGACTGTTG
GGAGCTGACTACAGCAAATATGACGTAAATAAGTTCAAGAAGGCTGCAGAAGTCCCCAAG
GATGATAGTATTGAGGTTAGCGGAACAGCCTCTACCAGTGAAAATGATCCTAACAAGACC
AACGCTATGGAGACTGAAGAGGGAATGAATGTAACATGA
Protein sequence:
MGRRNRNVNKFAQRKRERKEQEKNPQQKPADTRKHYEDIVRENAIFEEYYKAQKVCPDDQ
WDDFMRAIKKDLPTAFRITGSKCETDALLNIVKSQYFSEILNHKLKLDDEKEEEEIKPVN
LPWYPGGLVWQLPVSRTHIRRNEPLYRLHNFLVAETEAGGVSRQEAVSMIPPVVLQVEPH
HKVLDMCAAPGSKTAQLIEFLHSDEDKMPTGFVMANDVDNSRCYMLVHQAKRLNSPCIII
TNHDSAVLPSLVVSDEENPSATKPLKFDRVLCDVPCSGDATLRKNPDIWTKWSTGNGNNL
HGIQYRILRRGVELLSVGGRLVYSTCSFNPVENEAVVHRILQETGASVTLVDVQDLLPGL
KFHKGMTHWRPASKDMVFYNSYDEVPEKWQTVVRPQMFPPKTEDLDKYNLDRCIRILPHH
QDTGGFFVAVFEKTALLPWEKDPTKKPDVAADEPAEEPEKKEPPKKRRRMGGYREDPFVF
FSGENEDVFPSIKEFYDLDTKFDPTCLLTRCHVGKKKNIYLVSAMVKEVVQKNENSIKII
NTGVKTFVRCDNKNMKCPFRLSQEGLQSIAQYIGPKRRVTILKEDLILILQCDNPSKPPE
LKLFTEHTQNMVKDFATGSCVLEYKDTSSGLSLRLVGWRGVHSLRAYTAAPDTVHYLRLL
GADYSKYDVNKFKKAAEVPKDDSIEVSGTASTSENDPNKTNAMETEEGMNVT