| New model in OGS2.0 | DPOGS215147 |
|---|---|
| Genomic Position | scaffold4564:- 137-5002 |
| See gene structure | |
| CDS Length | 1083 |
| Paired RNAseq reads | 525 |
| Single RNAseq reads | 1357 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG31635, isoform B (6e-28) |
| Best Human hit | PREDICTED: leucine-rich repeat-containing protein 68 isoform 2 (9e-43) |
| Best NR hit (blastp) | Si:ch211-234g24.1 protein [Danio rerio] (5e-51) |
| Best NR hit (blastx) | PREDICTED: similar to Si:ch211-234g24.1 protein [Ciona intestinalis] (2e-45) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype |
| Orthology group | MCL15644 |
Nucleotide sequence:
ATGTCTGTTTATCTGTTCCCAGTACCCACGACTACACGGTCACAACTAGCAGCGGAATAT
TTGGAGTCATGCAGAAAACACAGAACACCACCCATAGATTCTGTCCTGCAGCAGATAAGG
GAACTACCAGACAATACCATAGGTGGTGGTGTCAGATCAGCTCGCCTGACCCTCTCCCAA
TGTTCGCTTCTCGGACCTCGTCCCATAGACGCTCTGGAAGCCCTCATGAGGAAGGTGCAG
TTCAGACGACTCGAGTTGGACCACGCCGATATAGACGATGAGGGAGCGGAGGCGTTATTT
GACATGATAGAATTCTATGAGAGCACATCGGCGATATGTCTGATGGGTCCACAGAGGTTC
GGCATCCGGGGATGGCAGGCTGCTTCCAGGATGATCAAGAAGAGTGTAGAGCTGACAGAG
TTGGAGGTGTGCGACAGTCCGTTAGAGTCGTCACACGCGCCAGTCCTAGAGAGGGCGCTC
CGCCCCGCCTCGTGTAGGTTGAGGGTGCTCTGCTTACAACAGGCAGCGCTAGCCGGGGAA
CCGCTGCTATGCCTCGTTATAGCGTTGAAGACGAACACATCGATCCGCGAGCTGCGGCTG
GGAGACAACAGACTCACGCCGTCAGACGCGCAGCAGATAGCATCAGTGCTGAGATACAAC
ACGAGATTACAACTATTGGATCTGTCTAATAACTTGATACAGGACTCTGGCGTGGAGTAC
ATTTCGTCAGCTCTTGTCGAACAAGCGGAGCACTCGCCACCGTCCGCGGTAGCGTCCCCG
CTCTCACCGCACTCCGCCTGCGGCTACGAGTCCACCGGTCTGGCGTTTCTCGTGCTGTGG
AACAACCAGCTAACGAGGAACTGCGCACAGAATCTAGCTAAAGTACTGCGCACATCAAAG
TCCCTGTGCGTTTTGAACGTCGGCCGTAACCCCCTGGGCTCGGAGGCCGTGAGGTCTCTA
GTGGGGCGAGGGTTGGTGTCCCTGGGCCTACAAGCCGCCAGGCTCGGACCGGACGCGGCC
AGGGGACTGGCTGATATTATAAGAGGGGGGGAGAGACTACAGGTTAGTGCTGGTATAACA
TAA
Protein sequence:
MSVYLFPVPTTTRSQLAAEYLESCRKHRTPPIDSVLQQIRELPDNTIGGGVRSARLTLSQ
CSLLGPRPIDALEALMRKVQFRRLELDHADIDDEGAEALFDMIEFYESTSAICLMGPQRF
GIRGWQAASRMIKKSVELTELEVCDSPLESSHAPVLERALRPASCRLRVLCLQQAALAGE
PLLCLVIALKTNTSIRELRLGDNRLTPSDAQQIASVLRYNTRLQLLDLSNNLIQDSGVEY
ISSALVEQAEHSPPSAVASPLSPHSACGYESTGLAFLVLWNNQLTRNCAQNLAKVLRTSK
SLCVLNVGRNPLGSEAVRSLVGRGLVSLGLQAARLGPDAARGLADIIRGGERLQVSAGIT