| New model in OGS2.0 | DPOGS204972 |
|---|---|
| Genomic Position | scaffold848:- 15253-21244 |
| See gene structure | |
| CDS Length | 2622 |
| Paired RNAseq reads | 1640 |
| Single RNAseq reads | 4696 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009979 (8e-08) |
| Best Drosophila hit | CG6923, isoform B (1e-20) |
| Best Human hit | RING finger protein 165 (5e-17) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL004356 [Aedes aegypti] (6e-27) |
| Best NR hit (blastx) | GI22448 [Drosophila mojavensis] (2e-22) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding |
| InterPro families | IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL31084 |
Nucleotide sequence:
ATGACTGAAAAAGGGTATGAGGGAGAGCAGTCTTCTGCTTGGGACATCCCGGGTCCGTCA
TCAATAGCTGCTATTTTAGATACAGTTTACACATCAACGACGTCTGAAAATCCGTCAAGA
AGTGAGGAAATGGAATGTGATCCATTATTCGCTGAAAGCGATGACGAAGTCGAAGTATTA
CCATCTGCTGAAAATGCATCTGCAAGGAGAGCTTCAACACCTAAAAACGCTATATCATCC
AATTACGTTAATTCAACATCCCCGAATCAGCCTTATGAAGTAAATGTGGCTTCCTTGTCC
CAGCCCATACCAGCACACACTCCGGTACCAGAAGAATATCAGCCACTACCCGACAGCTCT
AGTTCAGTAGAATATGGTATTGGAATTAACAATCCCGATAGCACCAATATCAATGGCTCG
AGATATCAGGATGTTAATATGAGATATCAACCCAAGCCTATCAATCTTCAAGGTGGCTAC
TTCTATTCTAACTACCCCCATTACGCTAGTGTTAGACCTGCTAGGGAATATTTAGTTGCA
CCTTACTCTACAAACAATATGATTGTTCTGGGTGAAGATAGGGGTTTTGTCAATCAGCCA
ATAAATTATACACTTTCTGCTAATCGCCCTCCTGTCATCCAAGATAGTAACATGCCTCAT
GTAGGATATGAGCATATACAACCCAATGTCAATGAAGGTTTCAATCCCTTTGCTGGAAAC
AGAAGTCACAATGAATCAAGAGGGAATGGCCTAGAAAGACCGAGTCGTAAATTAAACATA
TCTCCAAGAAGAAAGCTCTCAAAAGAAAATGAAGTGAACTTAAATTTGATAGAAGTTAGT
TCAGAGGAAGAAGACAATTCAGCATCCCAAAATGTAAATTTGATTGACAGTTCAGGTAGA
CAAATGTCCAATATAAATGCTGCTGGCAGTTCGAGAGCATCAATCAATGAAAATGTTGCC
AGAGTGGATGTGAAACGGGAACCACAGGAGGAGACGGAGTCATTGAATCAAACAAATCAA
AGTCAAACCGAACCAATGCGCACAAACCGGCCAGCCCATCAAAATCATTCACCGGGGGCA
GTAAGATACAAATGTGCCAAGCATCGTCATCCAGTACAAGTAAAACAGGAGCCACATGGA
TGTGCCTGCAGGAGCAATCACTTGCATTCATGCTCGCATCACAACCAGAACGCTCAAAGG
TCCAGTCCCAACTACTTCAACTACCGCAACGGATCTCACCACCATCGCCCAACATTCCCT
TGCGCTCACAACTCATCGGCATCAACGAATCCCGTCGTAGCTAATATCAAAGAAGAACCT
AACACCCACCCGGTTATCAAAGTGGAATCGCAGGATGTAGATAATGAACCTAATGTAGGA
GTTATTAAGGTTGAAACTGCACCGGTTGTAGTGAAATCCGAGCCAAGTGTGTCGAGTCCG
CAGAGGAGTAAGCAGGGTAGCAGTTCGGTGCAAGTGAAGCAGGAGACAAGGTGCTGTGAT
GTAGAAGCCGGCGGCGATAGAAGGATAAAGGAATCCTCGCCTCAACCGGGGACGAGCTCG
GGACGAAATGCACAAGAAAATAGTACGTCGGCTAGTCAGAGCGCTAGTTCTTATCAGGAA
GCTCAAAGAGGTGCAGATGCAGCAGATGCAGGTGCTGGTGCAGGTGCAGGTGCCAGCGGT
AACAGAAATGTTCTATCTGCTCCGGATCTACAACTCGATTGGGTCTCCGATTCTAGTTCT
GATGATGACGTGCAGTTGTTAAGAGAAGAACAAAACACGCGCGAAGTAATCGACTTGACC
AGTTCACCTCGCGGTCAAACACCGGAAGTGGAGAATCGTTCGCGGCCGCTGTTCGAGTCT
GTACCGCATCGAGACCCGCCCTTATACCACACGCCGCCAGTACCGACGCACGCGCACGTC
TTACACAGAACCAGGGTGCGTTGTTTGATGGCGTGTCGCGGTTGTTGTTGCGCGTCTCAC
GGCGGTCACGGGCACGCCCACGCCGCCCACGGACACACTCACGGGCACGCTCACGGCGCT
CACGTGCCGCTCGCGCCTCACGCCCACGCGCCGCATACAACGCACAATCCGCCGCCGCTA
GCACACCTAGGCGAACGGCGTCGGGACACAAATCCTATAGCGCCGCCGTATTTGGTCCAC
GAGAGGTTGTGGCATCGTCAACAACATATGCTGGAGGTCCAACGTCGCAGTATGATGGGT
GACATGAGCGGTCTGGCCTCGGGCTTCTCTCAGTATCCACCATCATATATATCACCTCGA
CCCAACACAATGCTGGCGGGTGGTGGTTTAGGCGCTACTCAGATGGCGGCCTTGGTGCGT
GTGGCGGAGGCAGCGGAAGCGCGACGAGCGGCCCGCGGCGCTTCACGAGCTGTCATAGAG
AGGAACACATACAGGCATGCATACACTATGCCATCCAACCACAGAGACGACAAATGCACC
ATATGTCTATGCGTGTTCGAGATAGATTCGGATTGCAGACGACTGCCCTGCATGCACCTG
TTTCATATGGAGTGTGTGGATCAGTGGCTCAGCACCAACAAACATTGTCCCATATGCCGA
GTTGATATTGAAACGCATCTCAACAAGGACGCCACGTTCTAA
Protein sequence:
MTEKGYEGEQSSAWDIPGPSSIAAILDTVYTSTTSENPSRSEEMECDPLFAESDDEVEVL
PSAENASARRASTPKNAISSNYVNSTSPNQPYEVNVASLSQPIPAHTPVPEEYQPLPDSS
SSVEYGIGINNPDSTNINGSRYQDVNMRYQPKPINLQGGYFYSNYPHYASVRPAREYLVA
PYSTNNMIVLGEDRGFVNQPINYTLSANRPPVIQDSNMPHVGYEHIQPNVNEGFNPFAGN
RSHNESRGNGLERPSRKLNISPRRKLSKENEVNLNLIEVSSEEEDNSASQNVNLIDSSGR
QMSNINAAGSSRASINENVARVDVKREPQEETESLNQTNQSQTEPMRTNRPAHQNHSPGA
VRYKCAKHRHPVQVKQEPHGCACRSNHLHSCSHHNQNAQRSSPNYFNYRNGSHHHRPTFP
CAHNSSASTNPVVANIKEEPNTHPVIKVESQDVDNEPNVGVIKVETAPVVVKSEPSVSSP
QRSKQGSSSVQVKQETRCCDVEAGGDRRIKESSPQPGTSSGRNAQENSTSASQSASSYQE
AQRGADAADAGAGAGAGASGNRNVLSAPDLQLDWVSDSSSDDDVQLLREEQNTREVIDLT
SSPRGQTPEVENRSRPLFESVPHRDPPLYHTPPVPTHAHVLHRTRVRCLMACRGCCCASH
GGHGHAHAAHGHTHGHAHGAHVPLAPHAHAPHTTHNPPPLAHLGERRRDTNPIAPPYLVH
ERLWHRQQHMLEVQRRSMMGDMSGLASGFSQYPPSYISPRPNTMLAGGGLGATQMAALVR
VAEAAEARRAARGASRAVIERNTYRHAYTMPSNHRDDKCTICLCVFEIDSDCRRLPCMHL
FHMECVDQWLSTNKHCPICRVDIETHLNKDATF