| New model in OGS2.0 | DPOGS205001 |
|---|---|
| Genomic Position | scaffold848:+ 8761-11611 |
| See gene structure | |
| CDS Length | 1296 |
| Paired RNAseq reads | 333 |
| Single RNAseq reads | 848 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009968 (1e-40) |
| Best Drosophila hit | CG33969, isoform A (6e-12) |
| Best Human hit | ND |
| Best NR hit (blastp) | F-box/WD-repeat protein, putative [Pediculus humanus corporis] (2e-21) |
| Best NR hit (blastx) | PREDICTED: similar to hagoromo [Nasonia vitripennis] (6e-23) |
| GeneOntology terms | ND |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR022364 F-box domain, Skp2-like IPR001810 F-box domain, cyclin-like IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL15809 |
Nucleotide sequence:
ATGACTACAAATTCACTTATCCAATTGCCGTTGGAGGTTTTAGCGAACATAGTGATACAT
TTAGAATTAAATGATATTCGTAACCTAATGCTAACATGTAAGACTTTTCACGGCTTAATA
GTTAATGAAAATATATTCATGAGACTAATATTTCGCAACAAATTGGTTTTACAGAATAGG
GGCAGGCAACACAATTCGTATTCTTGGTATAATAGATGTAGAATAAGTCACAATTGGCAA
AAAGGAATATATAGAAATAAGGTACTTGTCCAACACAATACAAATTATATGCCATGGTTG
CAATTTTTACATTCTGATACATTATACCTCTCGGTGGGTTCGGAATTAAAATGCTATAGT
CTCACCAGGAAAGGCTTAATTCCTTGTAATTTTTTGTGGTCAATAACTGTTCCGACAGTT
AGAAGGAATGATATACGAACAAATGACATATCAAGATTTGTTGTTAGAGATGGTGTCATA
GTGTGTGGCAATAGAGATGGAAATGTTTCGGTGTACGAATTGAACAATGATAGACAAAGA
CCGAACTTAATAAGCCACATAAAAAATTGTCATGAAAATGGTAGCATTGAAGTTTCAGCT
GTTGAAAGAATATGCAACACCGTGGTGACAATTTCACAAAATAGCCCTCATATATGTTAT
TGGAACTATGACGACTACAGAAATCATACAACTAATAAAACACATACAACTTTTTCTTCT
CCAGACAGTATGAAAACGATTGAAATATCACACGCAAAAGGGTGCAGGTGTGTGGCTCTG
AATAATTCGCAAGATAAATTAGCTATAGGATTGAACGGAAACAGCAAACCCATTATAGTT
GATGTCAATATGAGTACACCTTTAATTTATTCAGAAGAAACTGTGTGCTCGCAACATTTA
ACCAGAGACATACAATGGCATGATGATAACAGTGTTATTTCCGTATCACATTCTGGGAAA
CTTCAAATGATAGATGTTAGAAGTAATGATTTGGCTTATGACGCTACAGATCCTTTCCTA
TCATCGTTATTTTGTGTGAAAACTGATGGTAACCACGCCGTGGTTGTTGGCTCAGCGGAA
TATTCTAGATGTGTGCTATTCGATTTACGTTCCACACATCATGTTCAGATGTTTTTCACA
CAGAAAAAGGCGTCTTGTGTATATAGCTTGGACTTTGATTCTACGAGGTTGATAGCAGCT
GCCGACCGCGGTGTTGCTGCATTGAACTTCAACGTTAATCACCTTACCACTCAGGTGCGG
GACTACTCTCAGACCTTCGAAGTTATTCGTGGATGA
Protein sequence:
MTTNSLIQLPLEVLANIVIHLELNDIRNLMLTCKTFHGLIVNENIFMRLIFRNKLVLQNR
GRQHNSYSWYNRCRISHNWQKGIYRNKVLVQHNTNYMPWLQFLHSDTLYLSVGSELKCYS
LTRKGLIPCNFLWSITVPTVRRNDIRTNDISRFVVRDGVIVCGNRDGNVSVYELNNDRQR
PNLISHIKNCHENGSIEVSAVERICNTVVTISQNSPHICYWNYDDYRNHTTNKTHTTFSS
PDSMKTIEISHAKGCRCVALNNSQDKLAIGLNGNSKPIIVDVNMSTPLIYSEETVCSQHL
TRDIQWHDDNSVISVSHSGKLQMIDVRSNDLAYDATDPFLSSLFCVKTDGNHAVVVGSAE
YSRCVLFDLRSTHHVQMFFTQKKASCVYSLDFDSTRLIAAADRGVAALNFNVNHLTTQVR
DYSQTFEVIRG