New model in OGS2.0 | DPOGS212823  |
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Genomic Position | scaffold96:- 122586-123953 |
See gene structure | |
CDS Length | 1368 |
Paired RNAseq reads   | 1069 |
Single RNAseq reads   | 2472 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000769 (0.0) |
Best Drosophila hit   | CG11537, isoform C (1e-164) |
Best Human hit | hippocampus abundant transcript 1 (6e-142) |
Best NR hit (blastp)   | AGAP007253-PA [Anopheles gambiae str. PEST] (0.0) |
Best NR hit (blastx)   | AGAP007253-PB [Anopheles gambiae str. PEST] (0.0) |
GeneOntology terms    | GO:0015144 carbohydrate transmembrane transporter activity GO:0055085 transmembrane transport GO:0015904 tetracycline transport GO:0046677 response to antibiotic GO:0015520 tetracycline:hydrogen antiporter activity GO:0016021 integral to membrane |
InterPro families    | IPR016196 Major facilitator superfamily, general substrate transporter IPR020846 Major facilitator superfamily IPR005829 Sugar transporter, conserved site IPR001958 Tetracycline resistance protein, TetA IPR011701 Major facilitator superfamily MFS-1 |
Orthology group | MCL11566 |
Nucleotide sequence:
ATGTCGGGCATCGGGGAACCCTCGGTGTTCCACGCTTTAGTGGTAATATTTTTGGAGTTC
TTCGCGTGGGGATTACTCACGATGCCAATAATATCTGTCCTGAACGCCACGTTTCCAGAT
CATACGTTTTTGATGAACGGGCTTATTATGGGAATAAAAGGAATTTTGTCCTTTTTATCC
GCTCCTCTTATCGGAGCATTATCTGACGTGTGGGGAAGAAAGTTTTTCCTTTTGGTAACA
GTATTTTTTACCTGTGCACCTATACCACTGATGACCATTAACACATGGTGGTTCTTTGCG
ATGATAAGTATAAGTGGAGTGTTTGCTGTGACCTTCTCGATTGTATTCGCATACGTAGCC
GATGTCACCACCGAGGCTGAGCGGTCTCGCGCCTATGGTCTCGTGTCCGCCACCTTCGCC
GCCAGTATGGTCATATCACCTGCGTTAGGAGCTTACCTTATGGATTTGTATGGAGAGGCT
CTCGTCGTTGCGGCTGCCACTGCAGTAGCAGTGCTGGACGTCTTCTTCATCATGGTTGCA
GTTCCTGAAAGTCTTCCAGAGAAAGTACGACCCAGTGGCTGGGGGGCCAACATAAGCTGG
GAACAGGCAGACCCATTTGCTGCCCTCAGGAAAGTTGGTGCAGAACGCACAGTGCTTATG
TTGTGTGTTGCAGTGTTCCTATCCTATCTGCCAGAAGCCGGACAGTATTCATGCATATTT
GTATATTTGAAGCTAGTGATGGGTTTTGGTGTAGTGCAGGTGGCGATCTTTATTGCAATA
GTTGGTGTACTCAGTATTGCTGTGCAAGTGGTACTTGGATTTTTAATGAAATCTCTTGGT
GCAAAGCACACAATTATGCTTGGACTTTTGTTTGAAATGATGCAACTTATGTGGTATGGA
TTTGGGAGTCGCACTTGGATGATGTGGGCCGCTGGAGTCCTCGCCGCTTTAGGGTCTCTC
ACATATCCAGCCATCAGTGCATATGTGTCTGTAAATAGCCGAGCAGACAGGCAGGGTGTA
GTGCAAGGCATGGTAACTGGAGTTAGAGGGCTCTGCAATGGCCTTGGTCCTGCTATGTTT
GGTGTTATATTCTACCTATTCCATGTTGATCTTAATGAAGAACATGCAGTACCAGGAATA
AATACTCGACCAGATGATGAAAAGTATGTGCGATTGGTGCCCGGTCCACCATTTGTCTTG
GGGGCTCTTCTCGTTATATGTGCACTGCTTGTGGCCGCTTTCCTGCCTGAAGATGGAACA
GTGGGACCTCGAAGGTCTTCCCCCGATCTACGGTTCGAAGTGGAGCACGGCCGCCGCGTG
GCAGGTCCCCTGTCCCCCTTGATGGCCCCTGAATCTGCAGCTCTCTAG
Protein sequence:
MSGIGEPSVFHALVVIFLEFFAWGLLTMPIISVLNATFPDHTFLMNGLIMGIKGILSFLS
APLIGALSDVWGRKFFLLVTVFFTCAPIPLMTINTWWFFAMISISGVFAVTFSIVFAYVA
DVTTEAERSRAYGLVSATFAASMVISPALGAYLMDLYGEALVVAAATAVAVLDVFFIMVA
VPESLPEKVRPSGWGANISWEQADPFAALRKVGAERTVLMLCVAVFLSYLPEAGQYSCIF
VYLKLVMGFGVVQVAIFIAIVGVLSIAVQVVLGFLMKSLGAKHTIMLGLLFEMMQLMWYG
FGSRTWMMWAAGVLAALGSLTYPAISAYVSVNSRADRQGVVQGMVTGVRGLCNGLGPAMF
GVIFYLFHVDLNEEHAVPGINTRPDDEKYVRLVPGPPFVLGALLVICALLVAAFLPEDGT
VGPRRSSPDLRFEVEHGRRVAGPLSPLMAPESAAL