New model in OGS2.0 | DPOGS212850  |
---|---|
Genomic Position | scaffold96:+ 67280-70028 |
See gene structure | |
CDS Length | 1107 |
Paired RNAseq reads   | 1044 |
Single RNAseq reads   | 2843 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000793 (2e-131) |
Best Drosophila hit   | CG5484, isoform A (3e-70) |
Best Human hit | protein YIF1B isoform 3 (2e-57) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC010181 [Tribolium castaneum] (7e-87) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC010181 [Tribolium castaneum] (5e-85) |
GeneOntology terms    | GO:0016021 integral to membrane GO:0016020 membrane |
InterPro families   | IPR005578 Hrf1 |
Orthology group | MCL13512 |
Nucleotide sequence:
ATGAATTTTAACGCTTCAAGGAATGTGAATCCAGTGGGTGGGCCTCGTAAGGCTAAAAGA
GTGAGTGATGTATCAGCCATGGGAGTTCCTTCGCCGAGTCCGGCTTATAACACACCGCCA
GCATACAGTCAGGGATTTGAAACAGTCCCACCAGCAGCTCCATACCAGCAGGGGATCCAA
GTGGAAACTCGGCAAGACTTTGCAGCCTCTGAGCCCGCAGGAAATTTTGGCTACATGGCG
GGATACCCTCAGGCTCCCATGCCATCGGCTGCTAACATAGGGTCCATGCTTCATCAGCCC
ATTGTACAGGATATGGCGCTCCAGTACGGGTCGGTGCTGGCGGCGGAGGGGCGGGCGGCG
GTGTCCCGGGAGCTCGGCCGGTTCGTGCCGATGACCCGCCTCCGATACTACTTCGCAGTG
GACACCAGATACGTCCTCAAGAAACTCCTACTCCTTGTCTTCCCCTTCACACACAAGGAG
TGGATGGTGAGGTATGACCAGGACAGCCCCGTCCAGCCGCGGTATGACGTGAACGCGCCC
GACCTCTACCTCCCCGCCATGGGGTACGTCACCTACGTGCTGCTGGCCGGCTTCATGCTG
GGTCTTCAACAGAGGTTTTCACCAGAACAGATCAGTATCCAGGCGTCCAGCGCCCTGGCG
TACATAATCTTCGAGATGGTGTTGTACCTCATCACGCTGTACATCACCAACACGTCGACG
GCTCTCAAGACCCTGGATCTCTTGGCCTTCTCCGGCTACAAGTACTGCACGATGATCGCC
AGCCTGCTGTGCGCGCTCATGATGGGCAGCACCGGCTACTACTGCTGCTTGGCGTACGGC
AGCTGCGCATTGTCGTTCTTCCTGGTGAAGACGCTCCGCCTCCACTTGTTGTCCGGTCCC
CGCGAGGCCGAGCAGCGGTCGTCGTACGAGTACAGCTTCCCCGCCAACCCCAACCCTTAC
TCGGAGAGCTGGTCCAAGGCGGGCGCGGGCGGCACCAAGCGCCGGCTGTACTTCCTGCTG
TTCGTGGCCATCACCCAGCCTCTGCTGTCCTGGTGGCTCACCTACCACCTCGTCCCCGCG
CGGCCCGCCCTCACACAGGCTCGATAG
Protein sequence:
MNFNASRNVNPVGGPRKAKRVSDVSAMGVPSPSPAYNTPPAYSQGFETVPPAAPYQQGIQ
VETRQDFAASEPAGNFGYMAGYPQAPMPSAANIGSMLHQPIVQDMALQYGSVLAAEGRAA
VSRELGRFVPMTRLRYYFAVDTRYVLKKLLLLVFPFTHKEWMVRYDQDSPVQPRYDVNAP
DLYLPAMGYVTYVLLAGFMLGLQQRFSPEQISIQASSALAYIIFEMVLYLITLYITNTST
ALKTLDLLAFSGYKYCTMIASLLCALMMGSTGYYCCLAYGSCALSFFLVKTLRLHLLSGP
REAEQRSSYEYSFPANPNPYSESWSKAGAGGTKRRLYFLLFVAITQPLLSWWLTYHLVPA
RPALTQAR