| New model in OGS2.0 | DPOGS210567 |
|---|---|
| Genomic Position | scaffold7419:- 349-1908 |
| See gene structure | |
| CDS Length | 639 |
| Paired RNAseq reads | 480 |
| Single RNAseq reads | 4251 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007971 (7e-100) |
| Best Drosophila hit | Sec22 (1e-78) |
| Best Human hit | vesicle-trafficking protein SEC22b (8e-57) |
| Best NR hit (blastp) | PREDICTED: similar to snare protein sec22 [Tribolium castaneum] (2e-91) |
| Best NR hit (blastx) | PREDICTED: similar to snare protein sec22 [Tribolium castaneum] (1e-77) |
| GeneOntology terms | GO:0016192 vesicle-mediated transport GO:0005484 SNAP receptor activity GO:0030133 transport vesicle GO:0016021 integral to membrane GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR011012 Longin-like IPR010908 Longin IPR001388 Synaptobrevin |
| Orthology group | MCL16502 |
Nucleotide sequence:
ATGATCGCCCGTGTTGTAGACGGACTCCCTCTAGCCGCTACTATGCAGGAGGACGAACAG
AGCGGCTGTAATATATTGGAGTATCAAAACCAAGCAAAAATGCTGTTTAGAAAACTTAGC
CCTCAATCACCAATCCGCTGCTCCATTGAAACTGGGCCTTACCTCTTTCATTATCTAATT
GAGAACGAAATTTGCTATTTAGTGCTGTGTGAGAGAAATTACAGCAAACGACTTGCCTTC
AGTTACTTAGAAGAAATAGCACAGGAGTTCTACCAACAGTACGGGAAAAGAGTTAACACG
GTGACTCGTCCTTACACATTCATAGAGTTCGACACGTGGATGCAGCGCGCACGGAAGCAA
TATGCGGAAGGAGGGGCGAGGGCCCGGCGGGGAGGCGCGGCTGCCGCCCTGGGGGGGCAG
CTGGGGGATGTGCAACGGATCATGATGCAGAACATTGATGATGTACTGCAGAGAGGAGCC
ATACTTTCTGAACTCGATACCAAGACACAGAAGCTGTCGATGATGACACAGAAGTACAAG
AAGGACGCCACTTACTTGAACACCAAGTCAATGTTGGTGAAGGCCACGGCAGGTGCTGTG
ATCTTGCTGGTGGTCGTGCTATATTTCTGGGTGCTTTGA
Protein sequence:
MIARVVDGLPLAATMQEDEQSGCNILEYQNQAKMLFRKLSPQSPIRCSIETGPYLFHYLI
ENEICYLVLCERNYSKRLAFSYLEEIAQEFYQQYGKRVNTVTRPYTFIEFDTWMQRARKQ
YAEGGARARRGGAAAALGGQLGDVQRIMMQNIDDVLQRGAILSELDTKTQKLSMMTQKYK
KDATYLNTKSMLVKATAGAVILLVVVLYFWVL