New model in OGS2.0 | DPOGS212947  |
---|---|
Genomic Position | scaffold4074:+ 1-8059 |
See gene structure | |
CDS Length | 2469 |
Paired RNAseq reads   | 6144 |
Single RNAseq reads   | 13334 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001695 (1e-144) |
Best Drosophila hit   | CG9463 (6e-110) |
Best Human hit | lysosomal alpha-mannosidase isoform 1 precursor (8e-58) |
Best NR hit (blastp)   | GA21810 [Drosophila pseudoobscura pseudoobscura] (1e-118) |
Best NR hit (blastx)   | PREDICTED: similar to CG6206-PB, isoform B [Apis mellifera] (6e-85) |
GeneOntology terms    | GO:0005764 lysosome GO:0004559 alpha-mannosidase activity GO:0030246 carbohydrate binding GO:0006013 mannose metabolic process GO:0008270 zinc ion binding |
InterPro families    | IPR011013 Glycoside hydrolase-type carbohydrate-binding IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR000602 Glycoside hydrolase, family 38, core IPR013780 Glycosyl hydrolase, family 13, all-beta IPR015341 Glycoside hydrolase, family 38, central domain IPR011682 Glycosyl hydrolases 38, C-terminal |
Orthology group | MCL10136 |
Nucleotide sequence:
GTGCTCTGCAACGACGAGCCGATTATAGATGATGTGAACTCGCCCTTATATAACGTCGAA
GATAGAATAAACAAATTTCTGAAATCCGTTAACCAACAAGGCGAGTACTACAGAACGAAT
AATATTATACTAACGATGGGCGGCGACTTTACCTATCAAGATGCTGCGATGTGGTACATC
AACCTCGATAAGTTGGTAGAATATACAAATCTAAAGGCCGCCAAGGACGGCTTGAACATT
AAACTGTTCTACTCCACGCCCGATTGTTATCTGAAAGCCGTTAAAGATTCGAACCCGACT
CTGCCTACTAAACAGGACGATTTCTTTCCTTACGCGAGTGACCCCACCGCCTACTGGACG
GGGTACTTCACTTCGCGACCGACTACCAAATACTTCGAGAGACTCGGCAATAGATACTTA
CAGATGGTAAAGAATCTACAAGTGTTGGCCGGTTTGGAAGAACACAACAAATTTGTTATA
GACGAGCTGAAGAGTGCTATGGGTGTGATGCAACATCACGACGCCATAACTGGCACAGAA
AAGCAACACGTGGCTCACGACTACGAGAGGTTGCTGGACAACGCTGTCGAGGACGCGTTG
CTGGTGGCGAGGCAGGGAATCAGTAAATTATCTAAATCCGAAAAATATCAATTCAATTAC
GAGAGATGTCGTCTGAACGAGTCGAGCTGCGCTACGAGTGAGGACAGCCAACAGTTTGTG
GTGACTGTGTATAATCCACTCGGTTGGAATACCCTTGAACCGATACGTATCCCAGTCCTG
GACGGAGAGTACGAGGTTTACGCACCTAATGGAGAGAAAGTAACCTCCCAGCTGCTAGAC
ATACCGAACCCGGTTAGGAAAATACCGACCAGGAAGTCCGGAGCCACCCACGAGCTCACC
TTCATAGCGAAACTGCACCCGCTGTCGATAAAATCGTTCTTCATCAAGAAGATGCAACGA
ACAAGACGAGGAATAGATTACCGGAGTATAAAAAATTACTGGAGTAATATCGGCAGCCCG
TATATAGTGGAGAATATTGATTACGTAGGTAATATTGGGACCGATAAAATTGTCGTGCCC
TCGCATGTGAGCGGAACTGGAAGCAATATTAATTTTGATGTGCTGACGGATGAGGATTTG
AATGTGGGTAGAGCGGAGAATATGAGGAACAGAGATAAGGTCCCGAGGAACATGGAGAAG
ATGAGACATCCGAGTTTGACTGACGAGGAATACAGACTGCTGGCGGACGAACCGAGCGTC
GTGCAGAGAAGTGAGGAGTATTATTTGGAGAATGAGTTCCTGAAACTCCGTTCTGATGAT
ACAGGCGTCACTCACATGATTTTACCGGACAGGACAACCAACCTCAGGATACAGTTCCAC
TATTGGACCGGATGTTCCGGTGACAATACCAACACAACGACGCGATCTTCCGGCGCGTAC
ATCTTCAGACCGGAAACGGACAAACCGTATCCGTTAGAATATAACAGTAATAGAATAGTT
AAAGGGGAAGTAGTTCAGGAGATCCGGGCGGAGAGTGACACGGCGTCGAGTACGTTCAGG
GTGTACGGCGGGCTGCCTTTTATAGAGCACGACTTTGTTGTCGGACCGATACCCGTGGAC
GACAAAGTCGGCAAAGAATACGTCATCCGATACGACACTAATGTCGGCAACGACGGCGTC
TTCTTCACGGACAGCAACGGAAGACAAGTTCTCAAGAGGAAGTTGAATGAACGGCCCCAG
TGGAACCTCACGTTAGCGGAGCCGATCGCGGGGAATTATTACCCGGTGACGAGCAAGGTG
TTCTTAGAGGACGGGCATACGAGAATCACGGTGTTGGTGGACAGGTCCGAAGGGGGCACG
TCGCTAGTGCAGGGCGGCATAGAGCTGATGGTACATCGACGACTGTTACACGACGATGCA
TTCGGAGTGGGAGAGGCTCTGAACGAAGTAGCCCAAGGCGAAGGACTGGTAGTAAGGGGG
AGACACAGGCTCCTCAACCTGAATCCTAACGACGAACAAGAAACGCTGAGCGAAAAGAAG
TATGCTCTGCAAACACACTACGAGCCGATAGTGTTTGTATCGAAAGCAGAGCATATATCC
TACGAGAGCTGGCTAAAACTGAGTAATTGCTTCAAAGGCATGAAGCAGCTCCCGGACGGA
GTTCACCTCCTGACGCTGGAGATCTGGAGGGATAAAATACTCTTAAGATTCGAGAACTAT
ATCGATAGGGCTGTGCAAGTCGACCTTAATATCTTCAACACGATTAAGATTAAATCGGTG
AAAGAGACAACCCTAGCGGCCAACCAATGGCTGGAGGATCATACCAAATGGAATTGGAAC
ATCGAAGGTGAATTCCAAAATTCCGATTCCCAACCAAATCCGATTCCAGACGATTTGTCA
GATCTCAAATGTACACTGAAAGCTAAACAAATAAGGACCTTCATAGCTGACTATGAATTA
AATGCTTAA
Protein sequence:
VLCNDEPIIDDVNSPLYNVEDRINKFLKSVNQQGEYYRTNNIILTMGGDFTYQDAAMWYI
NLDKLVEYTNLKAAKDGLNIKLFYSTPDCYLKAVKDSNPTLPTKQDDFFPYASDPTAYWT
GYFTSRPTTKYFERLGNRYLQMVKNLQVLAGLEEHNKFVIDELKSAMGVMQHHDAITGTE
KQHVAHDYERLLDNAVEDALLVARQGISKLSKSEKYQFNYERCRLNESSCATSEDSQQFV
VTVYNPLGWNTLEPIRIPVLDGEYEVYAPNGEKVTSQLLDIPNPVRKIPTRKSGATHELT
FIAKLHPLSIKSFFIKKMQRTRRGIDYRSIKNYWSNIGSPYIVENIDYVGNIGTDKIVVP
SHVSGTGSNINFDVLTDEDLNVGRAENMRNRDKVPRNMEKMRHPSLTDEEYRLLADEPSV
VQRSEEYYLENEFLKLRSDDTGVTHMILPDRTTNLRIQFHYWTGCSGDNTNTTTRSSGAY
IFRPETDKPYPLEYNSNRIVKGEVVQEIRAESDTASSTFRVYGGLPFIEHDFVVGPIPVD
DKVGKEYVIRYDTNVGNDGVFFTDSNGRQVLKRKLNERPQWNLTLAEPIAGNYYPVTSKV
FLEDGHTRITVLVDRSEGGTSLVQGGIELMVHRRLLHDDAFGVGEALNEVAQGEGLVVRG
RHRLLNLNPNDEQETLSEKKYALQTHYEPIVFVSKAEHISYESWLKLSNCFKGMKQLPDG
VHLLTLEIWRDKILLRFENYIDRAVQVDLNIFNTIKIKSVKETTLAANQWLEDHTKWNWN
IEGEFQNSDSQPNPIPDDLSDLKCTLKAKQIRTFIADYELNA