| New model in OGS2.0 | DPOGS204467 |
|---|---|
| Genomic Position | scaffold754:- 38457-42197 |
| See gene structure | |
| CDS Length | 1044 |
| Paired RNAseq reads | 552 |
| Single RNAseq reads | 1908 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007807 (5e-58) |
| Best Drosophila hit | rhomboid-7 (2e-70) |
| Best Human hit | presenilins-associated rhomboid-like protein, mitochondrial isoform 1 preproprotein (1e-65) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013516 [Tribolium castaneum] (3e-96) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013516 [Tribolium castaneum] (2e-91) |
| GeneOntology terms | GO:0004252 serine-type endopeptidase activity GO:0016021 integral to membrane GO:0008053 mitochondrial fusion |
| InterPro families | IPR002610 Peptidase S54, rhomboid IPR022764 Peptidase S54, rhomboid domain |
| Orthology group | MCL14974 |
Nucleotide sequence:
ATGTTCTTCAGAAATGTTTGGTCTGCGGCGGAGATAAATGTTCTTTGCAAGCCACTATTC
TATAAGCAAACTTCGCAAAATTTGGGTAATGCTCGATTACAAATCCGTAGCGCGTTTCAT
AATTCAAGACGAAGTGCGCGTCGCCCAGGGCCGGATACCAATCCTTTAGATAGTATAAAT
GTTGAAACGGGGCCGTTATATGCTAGAGCCCTCTTTAAACCATTTCTCTTTACTATAGGG
GTATCCTCAATAAGTCTAGCTGGTTGTGTGATTTGGGAGTATGAAAACTTAAGAGCTCAT
GCTACTTCTTTCCTCAGAAGGCCAGGCAGTTGGTTGCATGCCCATCAAAAGAGATTTACA
GCACACATGAAATCAGATCCTGGTCCTATAGAAAAATGGTGGAAATCGCTAAAAGAAAGT
GAGAAAGTTTTCTACCCTATCCTCGCTGCAAATGTACTAGTCTTTGGTGCTTGGCGAGTT
AGATCATTTCAGCCATTTATGATCAAATACTTCTGTTCAAACCCGTCCAGCGTTGTAAAA
TGTCTGCCTATGGTATTGTCTACATTCAGTCATTATTCGGCTCTGCATTTAGCAGCAAAC
ATGTATGTTCTCTATAGTTTTATGCCAGCTGCCATAGCTTCTCTTGGCAAAGAGCAATTT
GTTGCGATGTATCTAAGCGCTGGTGTTATCAGCAGTTTTGCAAGTTTCATCTATAAAGTA
ATTTCCAATCAGCCCGGTCTCAGTCTCGGAGCGTCAGGTGCAATAATGTCAGTATTGTCT
TACGTCTGCGTACAATACCCTGACACTAGACTCAGCATTATATTCCTTCCCATGTACACA
TTTGCTGCTGGAAATGCAATAAAAGTTATAATGAGCGTTGACTTTGCTGGTGTTCTTTTT
GGGTGGAAATTCTTTGATCATGCCGCTCATCTCGGCGGAGCTCTCTTTGGAATGGCCTGG
TGTTATTGGGGTTCTCAACAAATTTGGGCGAAGAGGGAAAAGTTGCAGCAGTATTACCAC
AGCCTCAGAAAAGATTCCAGATAA
Protein sequence:
MFFRNVWSAAEINVLCKPLFYKQTSQNLGNARLQIRSAFHNSRRSARRPGPDTNPLDSIN
VETGPLYARALFKPFLFTIGVSSISLAGCVIWEYENLRAHATSFLRRPGSWLHAHQKRFT
AHMKSDPGPIEKWWKSLKESEKVFYPILAANVLVFGAWRVRSFQPFMIKYFCSNPSSVVK
CLPMVLSTFSHYSALHLAANMYVLYSFMPAAIASLGKEQFVAMYLSAGVISSFASFIYKV
ISNQPGLSLGASGAIMSVLSYVCVQYPDTRLSIIFLPMYTFAAGNAIKVIMSVDFAGVLF
GWKFFDHAAHLGGALFGMAWCYWGSQQIWAKREKLQQYYHSLRKDSR