| New model in OGS2.0 | DPOGS204468 |
|---|---|
| Genomic Position | scaffold754:- 22413-23471 |
| See gene structure | |
| CDS Length | 1059 |
| Paired RNAseq reads | 267 |
| Single RNAseq reads | 653 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007809 (1e-131) |
| Best Drosophila hit | nicotinic acetylcholine receptor beta 21C, isoform A (3e-22) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-10 precursor (6e-23) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 9 [Bombyx mori] (3e-140) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 9 [Bombyx mori] (8e-135) |
| GeneOntology terms | GO:0005262 calcium channel activity GO:0006811 ion transport GO:0042127 regulation of cell proliferation GO:0045211 postsynaptic membrane GO:0006816 calcium ion transport GO:0005102 receptor binding GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0042472 inner ear morphogenesis GO:0007271 synaptic transmission, cholinergic GO:0016020 membrane GO:0016021 integral to membrane GO:0005230 extracellular ligand-gated ion channel activity GO:0004872 receptor activity GO:0007204 elevation of cytosolic calcium ion concentration GO:0050910 detection of mechanical stimulus involved in sensory perception of sound GO:0005886 plasma membrane GO:0030054 cell junction GO:0045202 synapse GO:0005216 ion channel activity GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity |
| InterPro families | IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR006201 Neurotransmitter-gated ion-channel |
| Orthology group | MCL15110 |
Nucleotide sequence:
ATGACTTTCGATTCTTCAGAAGAAAAAATTACTATACATAGTTGGGTTGCTCTGAATTGG
CAGGATGAATTTTTAAAGTGGAATCCTAGCGATTATGGTAATATTAATGAAATTCAATTG
GAGAGCCATGAGGTTTGGTCGCCGCGTTTAGCGCTATTCAATGCCGACGCCAACTCGTAC
CCTTCCGACAGAATTTATACGACTTGTCTTCTGACTAATAATGGCTTAATGACCTGTGTT
CCTCAGCTGGCTCACACAGGAATATGTCGCACAAGTCTCAGCCGCTGGCCTTATGATGAT
CAAAACTGTACACTTTATTTCGGTTCATGGATGCATACAGGAGAGCAGGTGAACTTTACA
TTTTATAATAGTAGACCCGTAGTGCTTGATGATTTCCAGAATGCTCCAGGTTGGAAACTC
TTGAAAGTCGTGAACGAACGCTTGCCGGGAAAGTATACTTGTTGTCCAAATAGTACTTAT
CCAATGTTGAAATATACATTTATTTTGCGGAGGGAGGCCGCGGGACCAGCTGCAATAGTA
GTTATTCCTTCCGTTGTTTTAGTGTTGATTACGCTCTCCTCGTTGCTTTTGGACGTTAAA
GACAATATTCGTTTAGTGCTGGTATGTTTTAGTTTATTTGGGCACTTTACTTTTATTACA
GAAATAGGTTACATTGTGCCCAAGTTAAGTTCTGACACGCCGATAATTTTGTTGTTTGTC
CGTGATTCTATGATCGTGACATTAGTGGGGATTTTGGAGACGTTACTGCTCATGTCATTA
AGAAAAAGAGTTGTCCCCGCGCCAACATGGATTGTATCCGTCAATCGGCTTGTGACCAGC
GGCCCGGGAAAGTACGTGGTATTTACTGAGTTTGATCCATGTGAAGGTATAGAAGGAAAA
ACAATTGCAGACGAAGGAACAGCCAATGCAAGTGAAGATCGAACTCGAATCAATATGGAC
TGGATAAACTTCGCCAACTTCGTAAATAGTTGTGTGTTTATAATATCTTTTGTTGTTTAT
TTTGTTCTGGTATGCACTTATATACCTAGAGATGATTAA
Protein sequence:
MTFDSSEEKITIHSWVALNWQDEFLKWNPSDYGNINEIQLESHEVWSPRLALFNADANSY
PSDRIYTTCLLTNNGLMTCVPQLAHTGICRTSLSRWPYDDQNCTLYFGSWMHTGEQVNFT
FYNSRPVVLDDFQNAPGWKLLKVVNERLPGKYTCCPNSTYPMLKYTFILRREAAGPAAIV
VIPSVVLVLITLSSLLLDVKDNIRLVLVCFSLFGHFTFITEIGYIVPKLSSDTPIILLFV
RDSMIVTLVGILETLLLMSLRKRVVPAPTWIVSVNRLVTSGPGKYVVFTEFDPCEGIEGK
TIADEGTANASEDRTRINMDWINFANFVNSCVFIISFVVYFVLVCTYIPRDD