New model in OGS2.0 | DPOGS215194  |
---|---|
Genomic Position | scaffold1090:- 34393-39308 |
See gene structure | |
CDS Length | 1362 |
Paired RNAseq reads   | 203 |
Single RNAseq reads   | 977 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008671 (6e-153) |
Best Drosophila hit   | cyclin H (3e-102) |
Best Human hit | cyclin-H isoform 1 (6e-61) |
Best NR hit (blastp)   | AGAP008417-PA [Anopheles gambiae str. PEST] (6e-132) |
Best NR hit (blastx)   | AGAP008417-PA [Anopheles gambiae str. PEST] (1e-119) |
GeneOntology terms    | GO:0016538 cyclin-dependent protein kinase regulator activity GO:0016251 general RNA polymerase II transcription factor activity GO:0006367 transcription initiation from RNA polymerase II promoter GO:0005675 holo TFIIH complex GO:0007049 cell cycle |
InterPro families    | IPR015432 Cyclin H IPR015429 Transcription regulator cyclin IPR013763 Cyclin-related IPR005258 Cyclin ccl1 IPR011028 Cyclin-like IPR006670 Cyclin IPR002047 Adipokinetic hormone, conserved site IPR006671 Cyclin, N-terminal IPR010475 Adipokinetic hormone 2 |
Orthology group | MCL13353 |
Nucleotide sequence:
ATGTTTTCAACGAGTAGTCAGAGAAAGTTTTGGACGTTTAATGATGAAAGCGAGTTGGCT
CGCCACCGAGAGAAACATAATTTGGAATTCATCGCAAAACACGGTCATCATATAGACGAA
TATCAGAGGTACAATTTCTTTTTATCACCGGATGAAGAGCGACTTTTATTAAAGCAATAT
GAGCTGCATTTGAAAGAGTTCTGTAAAAGATTCGCTCCCCCGATGCCAAAAGGTGTAGTC
GGCACAGCTTTCCACTACTTCAAAAGATTTTATCTTTATAACTCATCAATGGACTATCAC
CCTAAAGAGATATTAGCTACATGCGTGTACCTTGCATGTAAAGTGGAAGAGTTCAATGTT
TCTATAGGTCAGTTTGTAGCAAATATTAAAGGTGACAGAGAGAAGGCCTCAGACATCATT
CTTAACAATGAATTACTATTAATGCAGCAATTAAACTATCACTTGACAATCCACAATCCT
TTCCGTCCTGTGGAAGGATTTCTTATTGACATTAAAACAAGGTGCAGTACTTTGGCAAAT
CCTGAACGCTTAAGAGGTGGAATTGATGAATTTCTGGAGAAAGTTTTTTTGACCGATGCT
TGTTTGTTGTATGCTCCGTCCCAGATAGCTCTGGCTGCGGTCCTACATGCAGCTAGCAAG
GAACAAGAGAATCTGGATAGCTATGTAACAGACATGCTATTTAGGGATGCCGGCTCCGAT
AAGCTGGCAATACTGATAGAAGCCGTCCGTAAAATACGCTCCATGGTGAAAATGGTTGAG
AGCCCAGCTCGGGAACGTGTTAGGATTATAGAGAAGAAACTAGATAGATGCCGGAATCAG
GAAAACAATCCTGACAGTGAAATATACAAGCGTAGGATGAGAGAACTCCTCGACGAAGAT
GACATGCCTCATACTGGGTCCACCAGGATGTCATTGGATACTAGCGATGGTAGATATAGC
TTCTTCACTTCGGCATATCACGGGTCCCGCGGATCTCTTGCCTCCCCAGCTCGACGTAAA
TGTCAGTTGGGCTTCCGTCATTGCAAAGATGGCGGCAAGAAGGAAGATGACGACCAAAAA
CTTGTACATTTTTTATTATTAGATACTGAACACTGTAGGAAGATTGGAAGCGCAGATGTT
TCTGATGCCCCGGACGGGGTTGGCGGGTTCCTGGTCATTCCAGAACTTATTACCAAGATG
GCAGGTCTCAGACGTTTGATGAAGAAGACAGCGCTCTGTCTGTTGTTCGCTTTCGCAAAC
CTCATCGCCGTCTCCGAGGGTCAACTCACCTTCTCCTCCGGCTGGGGCAAGAGGTCCCGA
GATGACGAAATAGCCATCGACCTCGAAGATCAGCTCCAATAA
Protein sequence:
MFSTSSQRKFWTFNDESELARHREKHNLEFIAKHGHHIDEYQRYNFFLSPDEERLLLKQY
ELHLKEFCKRFAPPMPKGVVGTAFHYFKRFYLYNSSMDYHPKEILATCVYLACKVEEFNV
SIGQFVANIKGDREKASDIILNNELLLMQQLNYHLTIHNPFRPVEGFLIDIKTRCSTLAN
PERLRGGIDEFLEKVFLTDACLLYAPSQIALAAVLHAASKEQENLDSYVTDMLFRDAGSD
KLAILIEAVRKIRSMVKMVESPARERVRIIEKKLDRCRNQENNPDSEIYKRRMRELLDED
DMPHTGSTRMSLDTSDGRYSFFTSAYHGSRGSLASPARRKCQLGFRHCKDGGKKEDDDQK
LVHFLLLDTEHCRKIGSADVSDAPDGVGGFLVIPELITKMAGLRRLMKKTALCLLFAFAN
LIAVSEGQLTFSSGWGKRSRDDEIAIDLEDQLQ