New model in OGS2.0 | DPOGS209780  |
---|---|
Genomic Position | scaffold1680:+ 47421-51951 |
See gene structure | |
CDS Length | 1368 |
Paired RNAseq reads   | 376 |
Single RNAseq reads   | 940 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008630 (5e-96) |
Best Drosophila hit   | ND |
Best Human hit | hypothetical protein LOC57700 isoform b (3e-33) |
Best NR hit (blastp)   | hypothetical protein LOC100036789 [Xenopus laevis] (2e-57) |
Best NR hit (blastx)   | hypothetical protein LOC100036789 [Xenopus laevis] (2e-40) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families   | IPR019384 Retinoic acid induced 16-like protein |
Orthology group | MCL12410 |
Nucleotide sequence:
ATGTTAAGCCGATTTTCAGACGCTTTGCAAACTGCTGCGGACGTTCTTGCCCCGCCGCCG
ACCAGACTTGAAGATTTCGAATATCATTGGAAAATGGTGCTTAACTTTTATCGAAATTAC
GATGAAAAGACGAAAGTACATATAGAAGACACGAGAGTTCCGCACCACTTGCATCAAATG
TTACAGTTAATAGTAGACGAAGAGAAAGAACAGAACGATGGAACGGTTGGACCGTGTCTG
GAGTCAATTATCCAGCGTTCCATATCACTGCTGGACGTCCTGGTAGCTCTGGCATCTGTG
GATAGGCCTCCAGGTGCCAGGGCTATGGCGCTATCATTAGCAACAGCTCTATTAAGACGT
ACGAGAAGGCCATGCATCAATAGCGCCCATGTTTATAGACCTTTGCAGAGAATGTTGGTA
CAGTGCAATGAAAGTCCAGCATCTCCCACGGAAAAGGAAGAAGTAGAGCTTCTTTTGACA
TTATGCGGCCTAGTCCGCAAGGAAACCGGCTTAGCAAACATATTCACTACGCCATTCGTG
GAGGACAAGGCGAGTCTGCTCAGCATACCCAAAGATATACAGACGCTGATACCCATCAAG
AAGAAACTTCACACCCCAAAGAAGAATCCGTTATTCGAAGTGAACATGACGCCGAGTCCA
ATGAAAACTGTTTCCATTGTCAGAATAAATAAAGACGATAATTGCCAGCAGTCGAACAGC
TCTGGTGACGATCACGAATCCTGTAAGAGTCAGAAGACGGTTAATGAGGATAATGATAAA
TTCCTCCTGATTGATCTGTTGCTGTCGTATTTGAATAGTGCTGATAACCAAGTGGTTCTC
CGGGCATGCGAGGGTATCATGATTGTGTCGTCGCTCCCGGAAGACGATATCGCTAATTTG
GTGACGAGCAGCCCGGCCTGTGAGACGATCATCGATAAATTGGTTAATAAGTACCGGGCC
ATCCCTAGTGACGTGGACCCGAATGACGTTGATCACTTGAACATAACGTGGGCGTATGTG
GCCCAAGATTTCGGTGACAAAAGTTACAATCGCTTCCACGGCTACAGGGAGCTGACGAGT
TTCTTTTCGTGGTTGGATTACGTGGACACTTTGATGAAGGAATGCCACCCCACCATATCG
TCTCACTTGGCTCGCATTTTCCGCTGCCACTTCCTGGACGCCGTTCCCGAAGCAGCCAGC
GGCGCTGTGTTGTCGTCAGCCTTGCTAGCGAAATGTCTCAGAGTGTTGGACGCGAGTGAT
CTCATACAGGAGATAGACGGAAACCTTGAGAAGGACATAGGCTACCTTTTATCCCGATCC
CGGCCCAAAAACCACACATGTTCGGGTTCAATTGTCGTAGTTGCATAA
Protein sequence:
MLSRFSDALQTAADVLAPPPTRLEDFEYHWKMVLNFYRNYDEKTKVHIEDTRVPHHLHQM
LQLIVDEEKEQNDGTVGPCLESIIQRSISLLDVLVALASVDRPPGARAMALSLATALLRR
TRRPCINSAHVYRPLQRMLVQCNESPASPTEKEEVELLLTLCGLVRKETGLANIFTTPFV
EDKASLLSIPKDIQTLIPIKKKLHTPKKNPLFEVNMTPSPMKTVSIVRINKDDNCQQSNS
SGDDHESCKSQKTVNEDNDKFLLIDLLLSYLNSADNQVVLRACEGIMIVSSLPEDDIANL
VTSSPACETIIDKLVNKYRAIPSDVDPNDVDHLNITWAYVAQDFGDKSYNRFHGYRELTS
FFSWLDYVDTLMKECHPTISSHLARIFRCHFLDAVPEAASGAVLSSALLAKCLRVLDASD
LIQEIDGNLEKDIGYLLSRSRPKNHTCSGSIVVVA