New model in OGS2.0 | DPOGS210627  |
---|---|
Genomic Position | scaffold2296:- 4298-10111 |
See gene structure | |
CDS Length | 948 |
Paired RNAseq reads   | 315 |
Single RNAseq reads   | 975 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013578 (1e-50) |
Best Drosophila hit   | CG3940 (2e-26) |
Best Human hit | carbonic anhydrase 1 (1e-25) |
Best NR hit (blastp)   | PREDICTED: similar to carbonic anhydrase [Tribolium castaneum] (2e-31) |
Best NR hit (blastx)   | glycosyl-phosphatidylinositol-linked carbonic anhydrase [Carcinus maenas] (1e-30) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0004089 carbonate dehydratase activity GO:0006730 one-carbon metabolic process GO:0005575 cellular_component GO:0046872 metal ion binding |
InterPro families    | IPR023561 Carbonic anhydrase, alpha-class IPR001148 Carbonic anhydrase, alpha-class, catalytic domain IPR018338 Carbonic anhydrase, alpha-class, conserved site |
Orthology group | MCL40868 |
Nucleotide sequence:
ATGTTGTTTGTGCCCTTTCTGGCTGCAGCGGCTGTTTGTACCGCAGCTGAAGATTGGTCG
TACGATTATGAAACCAAATGGCCGGGAGTATGCACGACTGGTGAGAAGCAGTCTCCAATA
AATATAATGTCGAGAGACGCTATAGTTGACAAACTTGGGACACACATCAAGGGACCGCTG
GTTTTCAGGGGATATGGTAGCGTGAACGTCAGTGGTGCCAACACCGGACACACGTTGAAA
TGGACGCTGGAAGAAGACGAGCCCAGCCCTGTAGTGTCCGGCGGTCCATTGAGAGGCAAC
TACAGCTTTGTACAATTTCATCTGCATTGGTTGTCGGAACACGCCATAGATGGAATGAAA
TATCCGATGGAAATTCATATGGTGCACATGAAGACTGGTCTGACCGCTGAGGAAGCAGTA
GAAAGACCTGATGGCATCGTTGTTATCGGGATTCTCTGTCAGGTACACAGTGGCGAGGAA
AGTGAATTTGCCCTGGGAGAACTGCAGCCATCTCTTCCGAAACTCATAGAACGTAGTGTG
GGCGCTGTACCGCCGACCGTGTTGGATCTCACACGTCTCTTCAGCCCCAATATGCAATCT
TTCTACACCTACCACGGCTCGATCACCACACCACTCTGTCAGGAGGTCGTAACTTGGCTA
GTTATGGACAAGCCACTCATCATATCTGACACCCAGTACAAACTCTTCAGTAAAGTGGAC
GTCGGCGGCATCGACAATTATAGAAGTCTTCAAGCAAACAACAGAGTTATTTACCGCAGT
TTAGCGTCCAGCTCTTCCATAGCTCTGCCCAGCACCATTGGCCTCCTAGCTTCATTATTC
CACCTGTCTTCAGCTATGACGATGGTTTTCAGTAAAGGCGTATGCACACTCGTAAATATC
AAAAAGAAATTCTTTGGACATGAAGTCAAGGAATGCAAATCTGATTAG
Protein sequence:
MLFVPFLAAAAVCTAAEDWSYDYETKWPGVCTTGEKQSPINIMSRDAIVDKLGTHIKGPL
VFRGYGSVNVSGANTGHTLKWTLEEDEPSPVVSGGPLRGNYSFVQFHLHWLSEHAIDGMK
YPMEIHMVHMKTGLTAEEAVERPDGIVVIGILCQVHSGEESEFALGELQPSLPKLIERSV
GAVPPTVLDLTRLFSPNMQSFYTYHGSITTPLCQEVVTWLVMDKPLIISDTQYKLFSKVD
VGGIDNYRSLQANNRVIYRSLASSSSIALPSTIGLLASLFHLSSAMTMVFSKGVCTLVNI
KKKFFGHEVKECKSD