| New model in OGS2.0 | DPOGS210524 |
|---|---|
| Genomic Position | scaffold296:+ 71601-72851 |
| See gene structure | |
| CDS Length | 585 |
| Paired RNAseq reads | 10148 |
| Single RNAseq reads | 36287 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012626 (3e-102) |
| Best Drosophila hit | ribosomal protein S9, isoform D (6e-89) |
| Best Human hit | 40S ribosomal protein S9 (2e-82) |
| Best NR hit (blastp) | ribosomal protein S9 [Manduca sexta] (1e-105) |
| Best NR hit (blastx) | ribosomal protein S9 [Manduca sexta] (2e-104) |
| GeneOntology terms | GO:0022627 cytosolic small ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0005840 ribosome GO:0019843 rRNA binding GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal IPR001912 Ribosomal protein S4/S9, N-terminal IPR002942 RNA-binding S4 IPR022801 Ribosomal protein S4/S9 IPR018079 Ribosomal protein S4, conserved site |
| Orthology group | MCL14503 |
Nucleotide sequence:
ATGGTGAACAACCGTGTGCCGTCGGTCTTTTCGAAGACGTACGTTACTCCGCGTCGTCCG
TTCGAGAAAGCGCGTCTCGATCAGGAGTTGAAGATCATCGGTGAATATGGTCTCCGCAAC
AAGCGTGAGGTGTGGAGGGTCAAGTACACGCTCGCCCGCATCCGTAAGGCTGCCCGTGAG
CTTCTCACCCTGGAGGAGAAGGACCCCAAGCGTCTGTTTGAAGGTAACGCACTCCTCCGT
CGTCTGGTGAGGATCGGTGTATTGGATGAGAAGCAGATGAAGCTGGATTACGTCCTGGGT
CTCAAGATCGAGGACTTCTTGGAGCGTCGTCTCCAGACCCAAGTGTTCAAAGCCGGTCTG
GCCAAGTCCATCCATCACGCTAGAATTCTCATCCGTCAAAGACACATCCGTGTCCGTAAA
CAAATAGTGAACATCCCATCGTTCATTGTCCGTCTGGACTCTGGCAAGCACATTGACTTC
TCTCTGAAGTCACCATTCGGTGGCGGCAGACCTGGTCGTGTCAAGAGGAAGAACCTCCGC
AAGGGTCAAGGCGGAGGAGCCACCAATGACGAGGAAGAGGACTAG
Protein sequence:
MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE
LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL
AKSIHHARILIRQRHIRVRKQIVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR
KGQGGGATNDEEED