New model in OGS2.0 | DPOGS201788  |
---|---|
Genomic Position | scaffold12:- 224097-229399 |
See gene structure | |
CDS Length | 1404 |
Paired RNAseq reads   | 972 |
Single RNAseq reads   | 2681 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013178 (4e-159) |
Best Drosophila hit   | CG3556 (3e-111) |
Best Human hit | ND |
Best NR hit (blastp)   | GE16347 [Drosophila yakuba] (2e-131) |
Best NR hit (blastx)   | GH17087p [Drosophila melanogaster] (1e-118) |
GeneOntology terms    | GO:0005575 cellular_component GO:0031419 cobalamin binding GO:0015889 cobalamin transport |
InterPro families    | IPR002157 Cobalamin (vitamin B12)-binding transporter, eukaryotic IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid |
Orthology group | MCL16197 |
Nucleotide sequence:
ATGATGTCTATACGTCTGTATGTGTTGTGCGCAGTGCTTTTGCACTTTACTGTCGCAAAA
GCACAGACTGAAACTGAACCAACGACCACTGTGGCCACTAAGGCTGTGACCACAGTGGCT
CCCACTACCGCTACATGGGAGTCGGAGACTTTGAACGAGGGCCAGGCGATCCAGAAGGCT
CTCCAATATCTCCTGAATCATCGCGAGTCCGACTGGGGCTGGGGCAATGACACCCACCAC
GTTATGTTGACTTTGCAGTTAGCAAATAATACCGGGAAGGAAATAGAGCAACAAGGATTG
GAGATGCAGCTGTCGGCCAAACAAATGGAGATTGAAATACTGCTCATGATGTCCAAGCAC
CATGAGTCCCCTCCTCCGCTAGGGCGCCTCGCTGCCTACACGCTGGCCTTGGGAGCGCTA
TGCAAGGATCCTCGTTCTTTCCACGGAAGGGACCTGGTAGCCGCTCTCCTACATCGAGAA
CCACCCCACGACCTCGAATTCGCTTACGCCACTTTAGCAGCCTGTTCCTCAGCGGCTCAT
GTAAGACGCCGCCACATCAGGAGACTCCTAGATATCGCCAACGCTGCAGCCGATCATAGC
CTCGATACCATATCGATGGTGATCCTGGCTTTGCGCTGCGTGGTTCAAGATCATCGTCAC
CGTAGCCTGATACATTTCGTGCGCCGTCCTATGGCCGGCCTGGCTCGTCAACAACACCCC
GACGGTAGCTTCGGGTCGCTGACCACCACCGCGTTGGCCATACAAGCTCTGGAAGATTCC
GACACAGGTCCCGGTGCCCATCAACATTGGAGTCTACCGGCTGCCCGCAAGTGGCTTCTG
GAGTGTCAGTCTTCGGACGGAGGTTGGGGCGACGCTTCCAGTACAGCAGCCGCTGTAGCC
GCTCTCACGCCAGCATCTCTGGCCGCTGTGCGACCACCGCATTGCAGCGACAAACTCCTA
GACAGCCGCCATGAACCACTCGACAACAACGGCGGTGACGGAACTCTGAAGTTGGCATAC
CAATCCCACTCTACAAACGACTCCGATGCGCGAAATGTTTCCTTCACCTACACTCTATGG
CTCGGCACCAATGTCACTGAGAACTACACCCTGTATATGGTAGCTCCGAGGAACATTTCA
TTCTACCACGTGATGCAAATGGCCGCTGAGCAGGAACCGAAATTCAAATTCGAAGCCAGC
GAATGGCCAAACGGTCACTACGTTCACACCCTCGCCGGTCACAAGGAAGAACCCATGGGA
TATCACTACTGGCTGCTCTACCGTCTGCCAGAAATCCCTGACCCCGCCAGCCCACCCGGC
AACCAACTCGTCGCTCCTGTCGGTGTGGACGACTTGATGGTGGAAGACGGAGAACATTAT
TTGTTCTGGTACAAGAAGCTGTAA
Protein sequence:
MMSIRLYVLCAVLLHFTVAKAQTETEPTTTVATKAVTTVAPTTATWESETLNEGQAIQKA
LQYLLNHRESDWGWGNDTHHVMLTLQLANNTGKEIEQQGLEMQLSAKQMEIEILLMMSKH
HESPPPLGRLAAYTLALGALCKDPRSFHGRDLVAALLHREPPHDLEFAYATLAACSSAAH
VRRRHIRRLLDIANAAADHSLDTISMVILALRCVVQDHRHRSLIHFVRRPMAGLARQQHP
DGSFGSLTTTALAIQALEDSDTGPGAHQHWSLPAARKWLLECQSSDGGWGDASSTAAAVA
ALTPASLAAVRPPHCSDKLLDSRHEPLDNNGGDGTLKLAYQSHSTNDSDARNVSFTYTLW
LGTNVTENYTLYMVAPRNISFYHVMQMAAEQEPKFKFEASEWPNGHYVHTLAGHKEEPMG
YHYWLLYRLPEIPDPASPPGNQLVAPVGVDDLMVEDGEHYLFWYKKL