New model in OGS2.0 | DPOGS201807  |
---|---|
Genomic Position | scaffold12:+ 108603-121877 |
See gene structure | |
CDS Length | 1536 |
Paired RNAseq reads   | 1288 |
Single RNAseq reads   | 3272 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013235 (0.0) |
Best Drosophila hit   | sluggish A, isoform G (0.0) |
Best Human hit | proline dehydrogenase, mitochondrial isoform 1 precursor (4e-125) |
Best NR hit (blastp)   | sluggish A, isoform A [Drosophila melanogaster] (0.0) |
Best NR hit (blastx)   | proline oxidase [Drosophila melanogaster] (0.0) |
GeneOntology terms    | GO:0007626 locomotory behavior GO:0042331 phototaxis GO:0004657 proline dehydrogenase activity GO:0006562 proline catabolic process GO:0005759 mitochondrial matrix GO:0006537 glutamate biosynthetic process GO:0055114 oxidation reduction |
InterPro families    | IPR002872 Proline dehydrogenase IPR015659 Proline oxidase |
Orthology group | MCL12762 |
Nucleotide sequence:
ATGCTGATGAAACGCCTCCGCCAGCTGGTCGGTCAGAGGCTGTTCGAAGCCATCATGAAG
GCCACCTTCTACGGCCAGTTCGTCGCCGGCGAGGACCAGATCAAGATACAACCGACGCTT
GACAGGCTGCGGTCGTTCGGTGTAAAGCCGATCCTCGATTATTCCGTGGAGGAAGATCTC
TCCCAGGAGGAGGCTGAGAAGCGCGAAGTGAGCGCTTCGATATCGACGTGCGGCGACACG
CAGGAGGAGGGTCAACTGAAGCAGTACCACGTGGAGCAGAGATTCGCTGATCGCCGGTAC
AAGGTCACCAGCGCTAGAACATACTTCTACCTGAACGAGGCCTCATGCGAGAAGAACATG
GAAGCGTTTATGAACAGCATCGACACCGTCGCCAAAATAACCAAGAGCACTGGACTTATG
GCCGTGAAACTAACAGCCCTTGGCAGACCACAGTTACTTCTCCAACTGTCCGAGGTGATA
ATGCGCGCCCGTAGCTATATGCAGCAGATAGCTGGCGGTACTGGGAACGTACTCGCCCAT
CATAAGACCATCGAAGACCTGCAGAGATACTTAGGGGATTACAGCGCTCGGCCCGAAGTA
CAGGACTTTATGAACAAAGTCACCTCCGACACGGAAGGTATCGTCCATCTTTTCCCGTGG
TCGAACATTCTGGATAAGGATATGGGTTTGTCAGATTCATTCCGCGTCCCTGACCCGAAG
ACCGGTCAGATGCGACGCCTCATCTCCCAGATATCGCCCAAGGAGGAGGAAATGTTCAGG
AACATGCTGCGGCGTCTCAACAATATAATACAGGTGGCCAACGAGCATGACGTCAGGATT
ATGATAGACGCCGAACAGACATACTTTCAGCCGGCCATCTCGAGGATCTGTCTCGAAATG
ATGAGGAGGTATAACAAGAACAAATTCCTCGTATTCAATACATACCAGACCTATCTGAAG
AACACGTACAACGAGATAGTGACTGATCTCGAACAGGCGCAGCGTCAGAACTTCTACTGG
GGTGCCAAGCTGGTCCGGGGGGCCTACATAGAGCAGGAGCGTGCCCGTTCAGCCGCTATG
GGCTACGAGGATCCCACGTGTGAGAGCGTCGACGCTACGACAGCATCATTCCACCGCTGT
CTCAAGGAAATACTCAGCCGGGTTAAGAACGAGCAAAACGATCGTCTCGGTATAATGGTG
GCCTCTCACAATGAGGACACCGTCCGTTATGCCATCCAGTTAATGAAGGAACACGGCATC
GGGCCGGGGGATAAGGTGGTGTGCTTCGGGCAACTGCTGGGGATGTGTGATCACATCACA
TTCCCATTGGGTCAAGCTGGTTATTCGGCTTATAAGTATGTTCCTTACGGTCCTGTGCTG
GAAGTGCTGCCATACTTGTCCCGTCGAGCAAATGAGAACAGAGGCTTCCTCCAGAAGATA
AAGAAGGAGAAGGGTCTGCTTCTAAAAGAGATATTCCGTAGAATGTTCAGCGGACAGCTG
TTCTACAAACCGTCTGGGAACTATACACCGGTTTAA
Protein sequence:
MLMKRLRQLVGQRLFEAIMKATFYGQFVAGEDQIKIQPTLDRLRSFGVKPILDYSVEEDL
SQEEAEKREVSASISTCGDTQEEGQLKQYHVEQRFADRRYKVTSARTYFYLNEASCEKNM
EAFMNSIDTVAKITKSTGLMAVKLTALGRPQLLLQLSEVIMRARSYMQQIAGGTGNVLAH
HKTIEDLQRYLGDYSARPEVQDFMNKVTSDTEGIVHLFPWSNILDKDMGLSDSFRVPDPK
TGQMRRLISQISPKEEEMFRNMLRRLNNIIQVANEHDVRIMIDAEQTYFQPAISRICLEM
MRRYNKNKFLVFNTYQTYLKNTYNEIVTDLEQAQRQNFYWGAKLVRGAYIEQERARSAAM
GYEDPTCESVDATTASFHRCLKEILSRVKNEQNDRLGIMVASHNEDTVRYAIQLMKEHGI
GPGDKVVCFGQLLGMCDHITFPLGQAGYSAYKYVPYGPVLEVLPYLSRRANENRGFLQKI
KKEKGLLLKEIFRRMFSGQLFYKPSGNYTPV