| New model in OGS2.0 | DPOGS201820 |
|---|---|
| Genomic Position | scaffold12:+ 334102-336277 |
| See gene structure | |
| CDS Length | 1596 |
| Paired RNAseq reads | 2909 |
| Single RNAseq reads | 8060 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013116 (0.0) |
| Best Drosophila hit | T-cp1zeta (0.0) |
| Best Human hit | T-complex protein 1 subunit zeta isoform a (0.0) |
| Best NR hit (blastp) | chaperonin subunit 6a zeta [Bombyx mori] (0.0) |
| Best NR hit (blastx) | chaperonin subunit 6a zeta [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0051082 unfolded protein binding GO:0006457 protein folding GO:0005832 chaperonin-containing T-complex GO:0042623 ATPase activity, coupled GO:0005524 ATP binding GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0031122 cytoplasmic microtubule organization GO:0005875 microtubule associated complex GO:0007099 centriole replication |
| InterPro families | IPR017998 Chaperone, tailless complex polypeptide 1 IPR012722 T-complex protein 1, zeta subunit IPR002423 Chaperonin Cpn60/TCP-1 IPR002194 Chaperonin TCP-1, conserved site |
| Orthology group | MCL11182 |
Nucleotide sequence:
ATGTCAGCAATAAGCTTATTAAATCCTAAAGCTGAATTCGCTCGCGCCGCCCAAGCTTTA
GCTGTAAACATCACAGCTGCGAAAGGAATTCAAGATGTAATGAAAACTAACCTCGGGCCG
AAAGGTACCATGAAAATGTTGGTGTCGGGGGCGGGGGATATCAAGATAACTAAGGATGGG
AACGTTCTGCTTCATGAAATGCAGATCCAGCATCCTACCGCGTCTCTGATAGCTCGCGCT
TCCACAGCTCAGGACGACGCCACAGGCGATGGCACAACTTCCACCGTGCTCCTCATTGGA
GAACTGTTGAAGCAGGCTGATATTTATATCAGTGAAGGACTCCATCCAAGAATAATTACT
GAAGGTTTTGATGTAGCCAGAAACAAGGCTCTTGAAGTTTTGGAATCCATGAAAATTCCT
ATTGAGATCAAAAGAGAAAACCTCATTGATATAACCCGTACAGCTTTAAAAACTAAGGTA
CATCCAAGTCTGGCTGAAGTTTTGACTGATGCTTGTGTGGATTCAGTACTGGCTATTAGA
GTTGAGGGTAAACCAGTTGATCTTCACATGGTGGAGCTGATGGAAATGCAGCACAAAACC
GCTACAGAGACTATACTTATAAAAGGTCTGGTAATGGATCATGGAGCTCGTCATCCTGAT
ATGCCGAAACGTGTAGAAAATGCATACATCCTGACTTGCAATGTTTCACTGGAGTATGAA
AAGACTGAGGTCAATTCTGGCTTCTTCTACAAGTCTGCTGAAGATAGGGAGAAGCTTATT
GCAGCTGAGAGAGAATTTATTGACCAACGAGTCAAGAAGATTGTAGCTCTGAAGAAGAAA
CTATGTGACGGCACTAAAAAATCATTTGTGGTCATCAACCAGAAGGGTATTGATCCCCTT
TCATTGGATGTACTTGCAAAAGAAGGTATCATTGCTCTGCGTAGGGCTAAGAGACGTAAC
ATGGAGCGTCTAGCGTTGGCCTGCGGAGGCATTGCTATGAACTCTGTCGATGATTTGAGT
GAAGAGTGCCTCGGCTATGCTGGTCTTGTGTATGAACATATTCTTGGAGAAGAGAAATAC
ACTTTTGTAGAAGAATGCAAGAATCCACAGTCTGTAACCATCCTAATCAAAGGCCCTAAC
AAACACACACTCGCACAAATTAAGGATGCCGTAAGAGATGGCCTTAGAGCAATCAACAAT
GCCATTGAAGACAAATGTCTCGTACCTGGAGCTGCTGCTTTTGAAGTGAAGGCTAACAAC
GAATTATTGAAGTTCAAGGACACGGTTAAGGGAAAGTTGCGTTTAGGCATACAGGCTTAT
GCCGAAGCATTGTTGGTGATTCCAAAAACTTTGGCCGTGAACTCTGGATATGACGCCCAG
GACACCATTGTGAAGCTACAAGAGGAATCTCGTTTGAACCCTGACCTTATTGGATTGGAT
CTTAGCACTGGTGAAGCGATAAAGCCAATTGATTTAGGCATTTACGACAACTATATTGTT
AAGAAACAGATCCTTAACTCTTGTTCAGTCATCGCTAGCAACCTCCTCCTTGTGGATGAA
ATCATGAGAGCTGGGATGTCCAGCCTTAAGGGCTAG
Protein sequence:
MSAISLLNPKAEFARAAQALAVNITAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG
NVLLHEMQIQHPTASLIARASTAQDDATGDGTTSTVLLIGELLKQADIYISEGLHPRIIT
EGFDVARNKALEVLESMKIPIEIKRENLIDITRTALKTKVHPSLAEVLTDACVDSVLAIR
VEGKPVDLHMVELMEMQHKTATETILIKGLVMDHGARHPDMPKRVENAYILTCNVSLEYE
KTEVNSGFFYKSAEDREKLIAAEREFIDQRVKKIVALKKKLCDGTKKSFVVINQKGIDPL
SLDVLAKEGIIALRRAKRRNMERLALACGGIAMNSVDDLSEECLGYAGLVYEHILGEEKY
TFVEECKNPQSVTILIKGPNKHTLAQIKDAVRDGLRAINNAIEDKCLVPGAAAFEVKANN
ELLKFKDTVKGKLRLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPDLIGLD
LSTGEAIKPIDLGIYDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLKG