| New model in OGS2.0 | DPOGS211458 |
|---|---|
| Genomic Position | scaffold1109:+ 24173-29086 |
| See gene structure | |
| CDS Length | 1494 |
| Paired RNAseq reads | 117 |
| Single RNAseq reads | 417 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002163 (5e-69) |
| Best Drosophila hit | CG14866, isoform A (1e-32) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to C-type lectin (AGAP002625-PA) [Tribolium castaneum] (9e-49) |
| Best NR hit (blastx) | PREDICTED: similar to C-type lectin (AGAP002625-PA) [Tribolium castaneum] (8e-44) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR016187 C-type lectin fold IPR016186 C-type lectin-like IPR001304 C-type lectin |
| Orthology group | MCL16873 |
Nucleotide sequence:
ATGTTCTTCGTTCGATGTTTTGAATTTATCGACAGAAAAAAACGCCAAGTGAAAGACAAG
AGCTCGAGCAGCACGCTTCCTGAGAAGACGGCTCCCGTCAGCACGTCCGTCAGCTCCGTG
GGCACGGAGGGTGGCCCGGCGGTCCCCGGCGGTCCGAGCGGCCCGGGGGGCTCGCTGCAG
AGTGTGTCGGCCGGCGCCAGCAGCATCCTGGCCGCCTCCACCACCAGCCTCGAGCTGCTC
GACAAACAGACACAGCCAGCGGGGGTGCCCGGGCTGCTGTCCGACCACCTGGCGGGGGGA
GCGGGGAGCGCGGGGCGGTCGGGGGTCGCCTGGCCCAGCGCCACCATCCCCGCCAGGGTC
AAACAACTCAGCTGGGAGGCGGACGAGACGCGCCCCCACACGGACGGGAACATGAACCTC
ACCATGGCGCTGCTGTTGTTCGGAGTGGCTTTATTAATAGCCGGCGTGAGTAGTGACAAC
TTCACGGAGTTAGAGTTATGTGCGGTGGAGGGTGACGGCCCCTGGAGCCGAGCTCTGGAA
GACTGGAGCATCTCGGCCGGCTCCGGCAGACACGGTAAGAACTTCAACACAGGTCGCATC
ATGGCGCTGCCGCAGAGTAAGGGCTACTACGTGTCGGATCGTGTCGAGACGCCCTTCCTG
TCCCCCCCGCCGCCTCTGTACAACCCTCAGGGGTACGCGCCCCCGGCGCAGGCCATGCAG
GTGCCGCACGGGTACAAGGAGTGGGAAGGGAAACCTTCACATCCCGGAAATGGCAAGATA
GTCAACCGGCCGCCCAATAAAGATAAATTTGCGCCGAGTTACCCCCCTCAGGGTCACCGG
CCCTCCATCGACCGCGTGGACGACCCCCCGCGGCGTCAGGTCACCGAGACAGACCTGTAC
CTCCTGAGCGCGGTCGAGAAACTCGCGCACCGAGCGGACTTCATGGAGAAGAGACTCCGG
CGACTCGAGGAAAGCCTGTACCACGCGCTGCAGAACAAGGAACCCGCCCCCGCGCCGTGT
CCCGGGAACTTCACCCGCGTGGGCTCGTCCTGTTACTCCGTGTCGTCCAGCCAGCGGGAC
TGGAAGGACGCGTCCCTGGCGTGTCGGGCGACACACGCCGCCCTGCTCGAGCTGGCCGAC
GAGAAACAGAAGAAGATCGTGCTGGCCTGGATGCTGGCCGACACGGACCGCAGAGGCGTG
GACTACTGGACGGGCGGCCTCAACCCCGGCCTGCTGTGGATCTGGTCGCACTCCGCCCGC
CCTGTCAACGGCAGCGTGGCGGGCGACGGGCGGTGCCTGGCCGCCGTCCACGACCCCGCC
CTCAACACGCACGTCTACAGGGGGAGGGACTGCGCCGCCAGGCTGCACTACATCTGTGTC
AAGGAGGACGACGGACATCTCAGTAACGAGGTGCAGAGAGCGGCCAGGGAACTCACGAGG
AGGAGAGAGGGAACCGGGGGAGAGACGGCGGGAGCGGGGGCGCGTACATTATAA
Protein sequence:
MFFVRCFEFIDRKKRQVKDKSSSSTLPEKTAPVSTSVSSVGTEGGPAVPGGPSGPGGSLQ
SVSAGASSILAASTTSLELLDKQTQPAGVPGLLSDHLAGGAGSAGRSGVAWPSATIPARV
KQLSWEADETRPHTDGNMNLTMALLLFGVALLIAGVSSDNFTELELCAVEGDGPWSRALE
DWSISAGSGRHGKNFNTGRIMALPQSKGYYVSDRVETPFLSPPPPLYNPQGYAPPAQAMQ
VPHGYKEWEGKPSHPGNGKIVNRPPNKDKFAPSYPPQGHRPSIDRVDDPPRRQVTETDLY
LLSAVEKLAHRADFMEKRLRRLEESLYHALQNKEPAPAPCPGNFTRVGSSCYSVSSSQRD
WKDASLACRATHAALLELADEKQKKIVLAWMLADTDRRGVDYWTGGLNPGLLWIWSHSAR
PVNGSVAGDGRCLAAVHDPALNTHVYRGRDCAARLHYICVKEDDGHLSNEVQRAARELTR
RREGTGGETAGAGARTL