New model in OGS2.0 | DPOGS210577  |
---|---|
Genomic Position | scaffold4084:+ 875-8038 |
See gene structure | |
CDS Length | 1527 |
Paired RNAseq reads   | 76 |
Single RNAseq reads   | 217 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013629 (3e-46) |
Best Drosophila hit   | CG31106 (2e-34) |
Best Human hit | synaptic vesicle glycoprotein 2C (1e-18) |
Best NR hit (blastp)   | synaptic vesicle glycoprotein 2B [Culex quinquefasciatus] (6e-53) |
Best NR hit (blastx)   | synaptic vesicle glycoprotein 2B [Culex quinquefasciatus] (2e-38) |
GeneOntology terms    | GO:0030672 synaptic vesicle membrane GO:0006810 transport GO:0005215 transporter activity GO:0055085 transmembrane transport GO:0006629 lipid metabolic process GO:0016298 lipase activity |
InterPro families    | IPR011701 Major facilitator superfamily MFS-1 IPR016196 Major facilitator superfamily, general substrate transporter IPR020846 Major facilitator superfamily |
Orthology group | MCL20855 |
Nucleotide sequence:
GCTTGTGTAGTTCATGTGTATAATAACAGAAATATGAAACCGGAAAAGGAAGAGTTGCCC
TCACAAAAAAATATCCAGAACAAATATATGGATGTGGATCTAGATAGAGCCTTGGACCTC
TCTGGCGCTGGAAGGTACCAGGTATTCCATTGTGCAATGATGTTGGCCGTTATTAGTACT
GTCATCGTTGAAATGATTGGAAACGCATTTATTTTACCAGCTGCGGTGTGTGACCTTGGA
TTGTCTAATAGTCTACGGGGTTTACTTACATCTGTTCCCAATATCGGCGTCATATTAACT
GCACCCGTTTGGGGCAGGGCAGCTGACGCGCTCGGTAGGAAACCAGTGCTGCTGTTTTCT
ACAGCAGTTTCAGGAATCTTTGCACTTGTGGCAGCTTTCATGCCGAATCTGATAAGTTTT
GCATTATTCAAGTTTGCAAGTTCGTTATTCCTTTCCTGTCCATCGTCACTGGGTTTCGCG
TATGCAGGAGAATTAATGCCACGACAAAAGAGAGATCTAGCAGTTATGATTTGCAATGCA
CTCTCAATGCTGACATCCACTTTTTGTCCCCTCCTTGCATGGGGCATTCTTTCATATAAT
TGGGACAGTAGCCCAATACCGCTACGTCCCTGGCGAGTGTTGACAGTTGTATACGCCGCT
CCTGTTATATGTGCTGCTATATGGGTCACCCAAGCCAAAGAGAGCCCCAAATTTCTTATG
GCTAAAGGCAGACATGAAGAGGCGCTGGATGTCTTGAAGCACATCTACGCTTTTAATACT
GGATTAGACAAAGAAAATTATTGTGTAAAATCATTGAAGATTTGTTCCGACCATACAATC
GAATATAACAGGGACTCGCCGAGCAGTGAAGAGGATTCATTATCTTTATTAAAACCGCCG
CATTTAAAGTGGCTCGTCTTGATCGGTTTCCTTATGTTCGGATTATTTTCACTGTTAAAC
GGGTTGTTTTTGTTTGTGCCTTTCACTTTAAACAAAGCGGTGCTGTCAGATAAACCACGA
ACTGTATGCGAATTAATAAACCAGCCTCAGAATCAGACGTCGGCTGTTTGCTCTGACACT
ATCTCCTATGGGACCTTCCAAGTCACAGTAATCTGTTCTCTCGTCTATGGAACCCTTGTG
ATGTTGGTCAGCCTCAGCTCCGTCTCCAAGAGGACCCAGCTCATCATCATGTACAGCCTC
GTGGGCGTCACTTGCATCATATCTGCCTTGACTACCAATAAGTTACTGGCAGGCATATCA
ATGTCGGCGCTTCAAATAACCGCTCTGGGAATCGGTCCACTAACAGCTTACGCCGTAGAG
ATGTTCCCAACCACTTTAAGGGGAACAGCTGTGGGTGCTGTCCTTATGTTTGGACGTGTG
GGTTCCGTAGTCGGAGCCAACTTGGCTGGGGTCTTCCTCGCTGGATCCTGTACAGCCACC
TTCTATGGCTTCTCAGGACTGTTATTCCTGTGTGCATTTTTGAGTGCCTTCTTACAACGA
GAACAAACTACCAACCAAGTGACATGA
Protein sequence:
ACVVHVYNNRNMKPEKEELPSQKNIQNKYMDVDLDRALDLSGAGRYQVFHCAMMLAVIST
VIVEMIGNAFILPAAVCDLGLSNSLRGLLTSVPNIGVILTAPVWGRAADALGRKPVLLFS
TAVSGIFALVAAFMPNLISFALFKFASSLFLSCPSSLGFAYAGELMPRQKRDLAVMICNA
LSMLTSTFCPLLAWGILSYNWDSSPIPLRPWRVLTVVYAAPVICAAIWVTQAKESPKFLM
AKGRHEEALDVLKHIYAFNTGLDKENYCVKSLKICSDHTIEYNRDSPSSEEDSLSLLKPP
HLKWLVLIGFLMFGLFSLLNGLFLFVPFTLNKAVLSDKPRTVCELINQPQNQTSAVCSDT
ISYGTFQVTVICSLVYGTLVMLVSLSSVSKRTQLIIMYSLVGVTCIISALTTNKLLAGIS
MSALQITALGIGPLTAYAVEMFPTTLRGTAVGAVLMFGRVGSVVGANLAGVFLAGSCTAT
FYGFSGLLFLCAFLSAFLQREQTTNQVT