| New model in OGS2.0 | DPOGS210703 |
|---|---|
| Genomic Position | scaffold673:- 100616-103817 |
| See gene structure | |
| CDS Length | 402 |
| Paired RNAseq reads | 10 |
| Single RNAseq reads | 417 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006403 (3e-06) |
| Best Drosophila hit | twin, isoform C (3e-26) |
| Best Human hit | CCR4-NOT transcription complex subunit 6 (7e-24) |
| Best NR hit (blastp) | twin, isoform B [Drosophila melanogaster] (5e-26) |
| Best NR hit (blastx) | CCR4 [Drosophila melanogaster] (7e-27) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0030014 CCR4-NOT complex GO:0030528 transcription regulator activity GO:0005737 cytoplasm GO:0005515 protein binding GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening GO:0048477 oogenesis |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | ND |
Nucleotide sequence:
ATGTCAAACAACAAGCTGAGAGCTCTGCCCGCGGAGTTAGGAGACCTCATACAGCTCAGA
GAGCTACACCTTCACAATAATTATTTAAGAGTACTGCCTTATGATCTCGGGAAACTGTTC
CATCTCCAAATGCTCGGTCTACAAGGGAATCCGCTCAGTAAAGAGATGCTCTCCATTTAC
AATGACAGCAACGGTACTGCCAAGCTGTTGACCTATCTACTTGATAATATGCAAGATGTT
TTCAATTTTCCGAGAGATGGCGCTGTCCCTCGATATTATTTGGTTTCAGTGCCATCTGTT
GGCGAAGTTTGTGATTACTACTCTATGTTATTTCTACATCATTTCTTGTATTGTTCAACG
GATGCCGCTTTTAACAATTTCATGTGTACGAGAGATTTTTAA
Protein sequence:
MSNNKLRALPAELGDLIQLRELHLHNNYLRVLPYDLGKLFHLQMLGLQGNPLSKEMLSIY
NDSNGTAKLLTYLLDNMQDVFNFPRDGAVPRYYLVSVPSVGEVCDYYSMLFLHHFLYCST
DAAFNNFMCTRDF