| New model in OGS2.0 | DPOGS211808 |
|---|---|
| Genomic Position | scaffold1006:+ 87599-105820 |
| See gene structure | |
| CDS Length | 1254 |
| Paired RNAseq reads | 45 |
| Single RNAseq reads | 132 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006132 (5e-106) |
| Best Drosophila hit | senseless-2 (1e-49) |
| Best Human hit | zinc finger protein Gfi-1 (3e-43) |
| Best NR hit (blastp) | growth factor independent 1 transcription repressor [Tribolium castaneum] (7e-76) |
| Best NR hit (blastx) | PREDICTED: similar to senseless-2 CG31632-PA [Tribolium castaneum] (2e-64) |
| GeneOntology terms | GO:0005634 nucleus GO:0003676 nucleic acid binding GO:0008270 zinc ion binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL11835 |
Nucleotide sequence:
ATGGAAGTAAGTGCGATGCCGCCGATGCCTTTGGACTTTTCTATGGTTCGTAGCGGAAGC
TCGCCGACCAGCCTGAGAGAGTCTCCGAGACCCGTCTCCAACAGCGCCTTCAGAGTCGTC
ACCCCCAAAGGTGTGTCTGCGAGCGAAGCTCTCCGTAACGGTCTCTGTCAGTCGCTGTGG
TCTCCCGCCACTCACCCTGAACCACGTCTGCCATCACCACATCCGCCAACCGACAACTAT
TCTCCTAGAGATGAAATTAAATTTGGCATCAATCGTTTGGTGGGCGAAAGAACTGACGAA
GAAGATAGCGAGTCCCACAATAATGGGACTTCCAGAGCTGAAAACTTATCACCCACGTCT
CGCTGTGGTAGTCCATGTTGGGATCCATCACCTCATTCCCCTCGCTCGGTTCGTTCAAGT
TCCCCTGAACTGGAAGTGGATTCCCCACCATCTTCGCCAAGAAGACCGCCAGATACTTCG
CCACCATTAAAAAGATCCGAGGCGTTTTCTGTGAGCGCCTTATTAAGACCCGATGCGCCG
AGGGTGCAGCCTCAGCGACCATTCTTATATCCACCGTTACCGTTTGCTGAATTCTTGAGA
GATGCAGGAAATCTTGGTTTACCGGGATGGGGAGGCTATAGCAATTTATACCTGCACGCA
GTTCAGGCTGCGGGTCCTGAACTTTTAAGGTTGAGGGCAGCAGTACTCGGAGCTCCAAGT
CCTCTATCAAGGCCTTTACCAATCGGCGACGTATACTCTTGCGTGAAATGCGAGAAGATG
TTCAGTACACCTCATGGATTAGAAGTACACGCAAGGAGATCCCACAACGGAAAAAGGCCA
TTCGCCTGTGAGCTCTGCAGCAAGACATTCGGCCACGAAATAAGCCTGAGTCAACATAGG
GCTGTCCACAGCGTGGAGAAGGTGTTTGAGTGTAAGCAGTGCGGGAAGACATTCAAGAGA
TCTAGTACTCTCTCGACACACCTCCTGATACACTCGGACACACGACCCTACCCCTGTCAG
TACTGCGGCAAACGTTTCCATCAGAAATCCGACATGAAGAAGCATACCTACATCCACACT
GACATCAGTGTGTTTGATGATCATGAATACAAGATGCTGCGGTGGGATGACGTTGTTTCG
TTAACACTTAAGCCAAGGGATAAGATCCTTGTGACGCTCTTACGACTACTTAACCCTAAA
CTGCCTTTGAGATTCTCATATTCTTTGACAATGGATGGGGTAAATCGTTACTGA
Protein sequence:
MEVSAMPPMPLDFSMVRSGSSPTSLRESPRPVSNSAFRVVTPKGVSASEALRNGLCQSLW
SPATHPEPRLPSPHPPTDNYSPRDEIKFGINRLVGERTDEEDSESHNNGTSRAENLSPTS
RCGSPCWDPSPHSPRSVRSSSPELEVDSPPSSPRRPPDTSPPLKRSEAFSVSALLRPDAP
RVQPQRPFLYPPLPFAEFLRDAGNLGLPGWGGYSNLYLHAVQAAGPELLRLRAAVLGAPS
PLSRPLPIGDVYSCVKCEKMFSTPHGLEVHARRSHNGKRPFACELCSKTFGHEISLSQHR
AVHSVEKVFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHT
DISVFDDHEYKMLRWDDVVSLTLKPRDKILVTLLRLLNPKLPLRFSYSLTMDGVNRY