New model in OGS2.0 | DPOGS206062  |
---|---|
Genomic Position | scaffold84:+ 1687-12335 |
See gene structure | |
CDS Length | 1446 |
Paired RNAseq reads   | 978 |
Single RNAseq reads   | 2445 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006845 (1e-77) |
Best Drosophila hit   | Smg6 (3e-12) |
Best Human hit | telomerase-binding protein EST1A isoform 2 (7e-15) |
Best NR hit (blastp)   | hypothetical protein Phum_PHUM014230 [Pediculus humanus corporis] (2e-74) |
Best NR hit (blastx)   | hypothetical protein Phum_PHUM014230 [Pediculus humanus corporis] (6e-55) |
GeneOntology terms    | GO:0016787 hydrolase activity GO:0005634 nucleus GO:0005694 chromosome GO:0005575 cellular_component GO:0003674 molecular_function GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0004518 nuclease activity GO:0004519 endonuclease activity GO:0000781 chromosome, telomeric region GO:0003677 DNA binding GO:0046872 metal ion binding GO:0008150 biological_process |
InterPro families   | IPR006596 Nucleotide binding protein, PINc |
Orthology group | MCL10459 |
Nucleotide sequence:
ATGCCATTCCATAGCTTGTGTGGTATCAGGAATCTTCTGGTTCACACGGCTTGGTGTTCG
TTCCGAGGAGTCAGCGGCGTCACTGGTAGTAACGGCGAGGAGCGCTCGGCTTGGTTAGAA
TGCGCTTTAGGTGTGTCCTTGCTAATGTTCGGTGCGCTGCTCGAGAGGTGCTGCGCGCTG
CTACCCGAGCCGCAGCACACCCAGCAGCACGCTGATGCATTGCTTCTTCTGCCTGCCATT
AAGATGTGGTCGGACTGGATGTTATGTCATAGCAGTATTTGGAATCCGCCACCTAGTTTT
GACAATTTCGAATTAGAAAGCGAAAACGATCCTTGGGATTGGCTCGCGAAGCTTATGAAC
ATATTGGAAGCCCTTGACGACAAATCATTAGAATTTGAGAACGAACCGAAGGAAGGATAT
ATTCCCGTAAGGCTGCCGGAGGATGCTTCCCTCGCTGGGTTCACGCCGCTCATGTACATG
GAGCCGGCGCTGGCGCACGTGGCGCCGCACGCGCACGTCGCGCCTCACGCCGCTGAACAC
GCGCTGCGCATGCGCAAGCTGCTGTTCTTCGGAACCGAATACCTGGTGGGTGTGGAGCCT
CCGGTGCTCAAGCTGGAGTACCCGGTCGGTGAACAGCCGCGGTATGTGAGTGCTGTACAG
CGAGCACAAGCAGACTACCCACCATTACAACATCTTTCTGAAGACTCGGAAGTCGACGAG
AGTGTGAGTACGACCAGCGGTCCGACGAGTCTGAGCGAGGCTGTGGAGGCCCCGGACGAC
GACACCAGGGACCTGCTGAGACGGAGGGACCTTCTGGAGAACAGGAGGGCCACCATAGAG
AAACGACGACAACGGATGCAGGAGATGCTTAGCACCGGATGGGTGAGCGTAGAAGTGGAA
GTTCGTCCGCGTTGGTTGGTACCCGACACCAACTGCTTCATCGACCACCTGCCGTTGTTA
CAAGCGGTGGCCAGCGCACCATCGCAGCCTTACAACCTCGCTGTGCCGCTCGTTGTTGTA
ACGGAGCTCGAGGGTTTGAAGAAGTGTTCTCGTTTGGGGGGTAAGGCGAGGGACGCCCTG
GCCTGGGTGTGCGGTGGTGGTGCGGGGGGTGCGGGAGGAGGTACTGTTAGGTTGGCTACA
GCCCGGGGCTCTCTGCTGACGTCACGGACTTTCACGGCCGAACAGGACGAGGGTAGAGCC
ACCAACGACGACCGCGTGCTGGCCACCGCTCTCAACCTGCAGGCGAATCTCACAGCTGAC
GGAGCGGAGGTCCGGGCGGACGGCGGCTGTGTTCGCGTGGTGGTGTTGGTGACGGACGAC
CGCAACCTGCGCGTGAAGGCTTTGTCGGCAGACCTGCCAGCCAAGGACCTGCTGTCATTC
GCGCAGTGGGCGGGACTGCACGCTGATACGAAACCCAAGTCGGACGCCCGCAGTGCCGAT
GTTTAA
Protein sequence:
MPFHSLCGIRNLLVHTAWCSFRGVSGVTGSNGEERSAWLECALGVSLLMFGALLERCCAL
LPEPQHTQQHADALLLLPAIKMWSDWMLCHSSIWNPPPSFDNFELESENDPWDWLAKLMN
ILEALDDKSLEFENEPKEGYIPVRLPEDASLAGFTPLMYMEPALAHVAPHAHVAPHAAEH
ALRMRKLLFFGTEYLVGVEPPVLKLEYPVGEQPRYVSAVQRAQADYPPLQHLSEDSEVDE
SVSTTSGPTSLSEAVEAPDDDTRDLLRRRDLLENRRATIEKRRQRMQEMLSTGWVSVEVE
VRPRWLVPDTNCFIDHLPLLQAVASAPSQPYNLAVPLVVVTELEGLKKCSRLGGKARDAL
AWVCGGGAGGAGGGTVRLATARGSLLTSRTFTAEQDEGRATNDDRVLATALNLQANLTAD
GAEVRADGGCVRVVVLVTDDRNLRVKALSADLPAKDLLSFAQWAGLHADTKPKSDARSAD
V