New model in OGS2.0 | DPOGS202169  |
---|---|
Genomic Position | scaffold981:- 15509-18038 |
See gene structure | |
CDS Length | 1149 |
Paired RNAseq reads   | 228 |
Single RNAseq reads   | 674 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003312 (3e-80) |
Best Drosophila hit   | CG6744 (1e-61) |
Best Human hit | exonuclease 3'-5' domain-containing protein 2 isoform 1 (7e-50) |
Best NR hit (blastp)   | 3-5 exonuclease [Aedes aegypti] (2e-86) |
Best NR hit (blastx)   | AGAP001549-PA [Anopheles gambiae str. PEST] (6e-78) |
GeneOntology terms    | GO:0008408 3'-5' exonuclease activity GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0003676 nucleic acid binding GO:0005622 intracellular |
InterPro families    | IPR002562 3'-5' exonuclease IPR012337 Ribonuclease H-like |
Orthology group | MCL15548 |
Nucleotide sequence:
ATGGCGAAGTCAAAAATCGTTATAACATCGGCGATCGCTGTAGGTTTTGTTGGTGTAACA
TACGTGATTTTGAAATATAAGATTAGATCTCGGAAAGCTGAAGATATCCTTAAAAATCTT
GATATTAATATCGTAACAACAAAAGCTCAATGCGACGAAGTTGTAAATGAAATGCGGAGG
AGGAGTACTTTACATCAGGCTATAGGTTTCGATTGTGAGTGGGTGACTGAAAATGGAAAT
AGACAACCCATAGCGCTTCTACAGCTGTCCACATTCGATGGATTCTGTGGGCTTTTAAGA
TTGAATCTTTTAAAAGAAGTTCCTATGTCACTGAAAGAACTTTTAGAGGATAAAAATATT
TACAAAGTAGGCGTAGCGCCCATTGATGATGCAAAGTATTTGATTCAGGACTATTCAATT
TATGTGAAGTCTACTTTGGATCTGAGGCATATAGTTGAACTAACCGGCCACACTGCTGGC
GGGTTGGCAGCACTGGCTAACACATATTTAGGTATTGTGCTAGATAAGAATTGGAGGATC
CGTTGCAGCGACTGGGCAGCAGAAGAGTTGACAGAACGGCAAATACATTACGCAGCGACC
GACGCTTATGTAGCAATAAAAATCTTTGTTGACATTATAAACACATATAACAGAGACTTT
TGGTTTTTCCTGTGGAGTAGAAACAGTGACAGACACTGGGGAAAAATACATGGTCTATGT
TCACGATATGCCGATGTTGGTTACAAAGTGAAAAACATTAAAGGATCTCATAAGGAGAAT
AAAAAAAGTAAAGAGAAGACTATAACCAAGAAGTATTCTCACAGCCCTCGTTCGAGGCCG
TTGTATCACAATTGTTTCATGGAAGCTCCTGATGGGGAAGTGCTATGTACATGTGATACG
AAAAAAGCAAAATGGTATTTGGACAATAAACTAGCAACCCTAATAAAAGACGATCCCCTT
ACAATTCGTCTTGCATTCGAACCGGCCGGTCGGTCTGTGGGGGAAGTCGGTCGCTACTAC
ACGCTCGTGAAGGAGAACAAGTGCGTTGTCTGTGGGGCCATGGACTCTTATATACGGAAA
AATGTTGTACCCAGAGAATATAGGAAATATTTCCCAGGTAATTTGGTTTCCAATATATAT
GTGAAATGA
Protein sequence:
MAKSKIVITSAIAVGFVGVTYVILKYKIRSRKAEDILKNLDINIVTTKAQCDEVVNEMRR
RSTLHQAIGFDCEWVTENGNRQPIALLQLSTFDGFCGLLRLNLLKEVPMSLKELLEDKNI
YKVGVAPIDDAKYLIQDYSIYVKSTLDLRHIVELTGHTAGGLAALANTYLGIVLDKNWRI
RCSDWAAEELTERQIHYAATDAYVAIKIFVDIINTYNRDFWFFLWSRNSDRHWGKIHGLC
SRYADVGYKVKNIKGSHKENKKSKEKTITKKYSHSPRSRPLYHNCFMEAPDGEVLCTCDT
KKAKWYLDNKLATLIKDDPLTIRLAFEPAGRSVGEVGRYYTLVKENKCVVCGAMDSYIRK
NVVPREYRKYFPGNLVSNIYVK