DPGLEAN14588 in OGS1.0

New model in OGS2.0DPOGS202155 
Genomic Positionscaffold981:+ 18427-20916
See gene structure
CDS Length2490
Paired RNAseq reads  2221
Single RNAseq reads  5084
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA003429 (0.0)
Best Drosophila hit  CG10333 (0.0)
Best Human hitprobable ATP-dependent RNA helicase DDX23 (0.0)
Best NR hit (blastp)  GM17282 [Drosophila sechellia] (0.0)
Best NR hit (blastx)  DEAD box ATP-dependent RNA helicase [Aedes aegypti] (0.0)
GeneOntology terms







  
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0004004 ATP-dependent RNA helicase activity
GO:0005681 spliceosomal complex
GO:0030532 small nuclear ribonucleoprotein complex
GO:0005682 U5 snRNP
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
GO:0071011 precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome
InterPro families



  
IPR014001 DEAD-like helicase
IPR001650 Helicase, C-terminal
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Orthology groupMCL13701

Nucleotide sequence:

ATGGGTAGAGAAAGAAGCGCAGAACGTCGACGATCTCGTTCTCGAGATAGGCGTGAGAGG
GACCGTCACGATGACCGCGATACTTATAAAGATAAATTAAAACGACGTGATAGATCCAGA
AGCCCGAGGAAAGAAAAATCCCGTAGTCCTTCGAAAAAGGAATCAGACGTTCGCTCTCGT
AGCCCAAGAAGAGAAAAAGAGCGTTCCAGAAGTCCGATTCGTAAAGAACGCGCCCGCTCT
AGAAGTCCACGTAAACGTGATGGCAAAGATAAAGACCGGCGGCCAGATGACAGAGAGAAG
AATAAAACTAAAAAGGAAGAAGAGAAAACAGAGGAAGAACCCAAAATGGAAGAAGAACCT
AAGCCCGTAAAACGAGAGCCTCTATCTCTAGAAGAGTTACTCGCCAAAAAGAAGGCTGAA
GAAGAGGCGCGAAGTAAACCAGTATTCTTAACAAAGGAACAACGAGCAGCCTTGGCACTC
GAAAGACGCAGAGAACAAGTTGAAGCCATGAGAGCTGCTGAACGACCAGCTGCGGTGGCG
ACGATAGATCTTACAGGAACTTCAAAGAAGGATGATGAAAAAAAATACCGTGACGACAGG
GAAAAAGAAAGGGAACACGACAAAGAGCGAGAAAGAGAAAGAGAGCGAGAAAGAGAGAAA
GAAAGAGAAAGAAGACACGAAGAGAGAAAATCAGGGGCCGATCGTAATAGAGATGATAAA
AAAGAGAAAAATGAAGAATACAGCAAAACTAAAGATAAAGAAAGAGAGGAAGAAGCCATC
AAAGCGAGGTACTTAGGTATAGTTAAAAAAAAGCGTCGAGTGAGACGGTTAAATGATCGG
AAGTTTGTATTTGATTGGGACGCTTCTGAAGACACATCAAATGATTACAATGCACTTTAT
AAGGAGAGACATCAAGTGCAATTTTTTGGACGCGGCCACATTGCTGGCATTGATATTAAA
TCACAGAAAAAGGATTATTGCAAATTCTATGGCAATTTGTTGGAGAAAAGGAGAACAGAA
TTGGAGAAAGAACAAGAAAAATCTCGCCTAAAGAAAGTTAAGAAGAAGGAAGACAAACAG
AAATGGGATGACAGACACTGGTCGGAGAAAGATCAAGATGAGATGACAGAGAGAGATTGG
AGAATCTTCAGAGAGGATTACAATATTACTTTGAAAGGTGGAAGAATACCTAATCCGATT
CGTTCATGGAAAGAAGCTAACTTTCATGAAGATATTATGGAGATCATTAGCAAAGTTGGC
TACAAAAGCCCTACACCTATTCAACGACAAGCCATTCCAATTGGTCTTCAAAATAGGGAC
ATAATTGGTGTAGCTGAAACTGGTTCTGGTAAAACATTAGCATTTCTCATACCACTGCTT
ACTTGGATACAGTCTTTGCCTAAAAATGAGAGGATGGAAGATGCTGATCAAGGTCCGTAT
GCTATAATTCTGGCCCCAACTCGTGAATTGGCACAACAAATTGAGGAAGAAACAAATAAG
TTCGGTATACCGCTTGGTATAACATCTGTCGTTGTTGTGGGAGGTCTGTCGAGGGAGGAG
CAAGGATTCAAGTTACGTCTAGGATGTGAGATCGTCATCGCCACGCCGGGTCGTCTCATA
GACGTATTAGAAAATCGATATCTTGTGCTCAATCGCTGCACTTATGTGGTTCTTGACGAA
GCCGATCGTATGATAGACATGGGTTTCGAACCTGATGTACAAAAAATTCTCGAATACATG
CCCGTGTCTAACATAAAACCCGACACAGATGCTGCCGAGGACGCATCAGTGCTTCTTGCT
AATTACAATTCTAAAAAGAAATTCCGTCAAACCGTGATGTTCACGGCTACTATGCCGCCG
GCCGTTGAAAGACTCGCCCGAACATATTTACGTAGGCCGGCCATAGTGTACATCGGATCT
GTTGGCAAACCAGTCGACAGAACAGAACAAGTCGTCTTCATGATCGGTGAGAATGAGAAA
CGCAGGAAGCTAACTGAGATATTACAACGCGGAGTCGAACCACCGATCATTATATTCGTC
AACCAAAAGAAGGGTGCAGATGTTCTTGCGAAAGGTTTGGAAAAACTGGGTTTCAATGCC
TGTACATTACATGGTGGTAAAGGCCAGGAACAACGTGACTTCGCTCTAGCTTCCCTCAAA
AATGGTTCGAAGGATATACTGGTTGCTACAGATGTGGCCGGTCGTGGTATTGATATTAAA
GATGTCAGTGTGGTCATTAATTATGACATGGCTAAGAGTATAGAAGACTACACACATCGC
ATTGGTCGTACCGGTCGTGCTGGCAAGACTGGTAAGGCTGTATCATTTGTTACTAAAGAG
GATTCTGCTATATACTATGATCTGAAGCAAGTGCTACTCGCCAGCTCAGTGTCCACATGC
CCTCCAGAGTTAATGAACCATCCAGAGGCTCAACACAAACCCGGAACTGTGGTAACCAAG
AAGAGAAGAGAGGAAATGATATTTGCTTAA

Protein sequence:

MGRERSAERRRSRSRDRRERDRHDDRDTYKDKLKRRDRSRSPRKEKSRSPSKKESDVRSR
SPRREKERSRSPIRKERARSRSPRKRDGKDKDRRPDDREKNKTKKEEEKTEEEPKMEEEP
KPVKREPLSLEELLAKKKAEEEARSKPVFLTKEQRAALALERRREQVEAMRAAERPAAVA
TIDLTGTSKKDDEKKYRDDREKEREHDKEREREREREREKERERRHEERKSGADRNRDDK
KEKNEEYSKTKDKEREEEAIKARYLGIVKKKRRVRRLNDRKFVFDWDASEDTSNDYNALY
KERHQVQFFGRGHIAGIDIKSQKKDYCKFYGNLLEKRRTELEKEQEKSRLKKVKKKEDKQ
KWDDRHWSEKDQDEMTERDWRIFREDYNITLKGGRIPNPIRSWKEANFHEDIMEIISKVG
YKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSLPKNERMEDADQGPY
AIILAPTRELAQQIEEETNKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLI
DVLENRYLVLNRCTYVVLDEADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLA
NYNSKKKFRQTVMFTATMPPAVERLARTYLRRPAIVYIGSVGKPVDRTEQVVFMIGENEK
RRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLK
NGSKDILVATDVAGRGIDIKDVSVVINYDMAKSIEDYTHRIGRTGRAGKTGKAVSFVTKE
DSAIYYDLKQVLLASSVSTCPPELMNHPEAQHKPGTVVTKKRREEMIFA