New model in OGS2.0 | DPOGS204366  |
---|---|
Genomic Position | scaffold2527:- 146-3526 |
See gene structure | |
CDS Length | 1329 |
Paired RNAseq reads   | 1164 |
Single RNAseq reads   | 2837 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005889 (2e-141) |
Best Drosophila hit   | CG10703 (2e-19) |
Best Human hit | GRIP and coiled-coil domain-containing protein 1 (8e-08) |
Best NR hit (blastp)   | hypothetical protein BRAFLDRAFT_96606 [Branchiostoma floridae] (9e-45) |
Best NR hit (blastx)   | PREDICTED: similar to Apaf-1 [Strongylocentrotus purpuratus] (2e-38) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families   | ND |
Orthology group | MCL15680 |
Nucleotide sequence:
ATGGAATCGTTGTCTAAACAAGAGCTGATATCTACCATAACAAAACAAGCAGATCAAATC
AAAAGATACGAAGCTCGTTTAAGAGATGTTGTTGCTGCGTACAAAGGCCTTGTAAAGGAA
AAAGAGGCCTTGGAGATTAGTTTGAAGGCCTTAAATAAAACAGATGACGATGGAAGTGGA
GCAGGATCTCCAGATTCAATTGCAGCTCTCACTCTATCTCTCTCAACTCTTACAGCAGAA
AAGAATCGTATGGAAGAAGTCTTTCAAGCGGACAAGAAAGTTACAAGGGAGAAGTATGAG
AACATGTTAGCATCAATGAGAGAGGAAACAAAGAGTCTGGTGCAGCAACATTTAGCGGAA
GTCGCAAATCTGAAGACTAAGATAGCATACGAGATACAAGAAAGAGAAAAAGAAAGAGCC
GATCATGCAGCTATGTTGAAAGAGCTGCATCTGAAGTTGAATACAGAAAGGAAAAACAAA
GAAAAGTTGGAGGACAAAGTTGTTCAAAATACAGAGTCCGAAGCGTCGCAGGCCGACCTG
GAGAAACGCGTCCGAGATCTGAGCGGGTATCTGGAAGCGAGTCAACGGCGACTGATGCGT
GCTGAGGCGAGGACGGCGGAAACCCCGGCGCTGCTGGTGAGGCTGCAGCAGAAGCTGGCG
CTGCTGGAGCAGACGCACGCGGTGGCTATACGAGAGGAACAGATTAAAGCGAAACGTGCC
GAGGAATCAGCTCGGAAGATATGTGCCAGGCAGGAGGAACGAGTGGCGCTGCTTGAGGGT
AAGGTGGCCGAGCTGTCACAGACGATAGGAGAGTATGACATGATGAGGAGACGAGACCAG
AACACCATACAGCAACTGAGAGAGTCCTTTAATGGCAGGTTACTGGAAAAGATTGCCAGT
AACGGCTCCGATGGCACTGACGGTGATAATGATGAAACGCAAAAAAGCGAGACGGACAAT
GAAAAATTAGCGGACAGTGAATATTTGCAAACTTTGATAGACAAAATACACATACTGAAG
AAAGAGCTACTGGCCGAGAACGAGAAAGTAGGGAGTCCGGTCGACATTACGACCGTCTTC
AAAGTGGACGGCTACGACGACATCCACAGGAAGTGCAGAGAGGAGTACGACAATTTGAAA
ATCGAATACGACAATTATAAGTTCCTGAACGTCAAAGTGACGGGAGGCGATGAGAGCGAG
ACGGAAGATCTGAAGAGCGAGATAGCGATATTGAAAGAGAAAGTTGACACTTACGTGTTA
CTGCTGGAGGAAGAGAAACAGGTTAAGGCTGAGCTGCTGCGGCTTCACGAAGAGGTATTA
TATGCATAG
Protein sequence:
MESLSKQELISTITKQADQIKRYEARLRDVVAAYKGLVKEKEALEISLKALNKTDDDGSG
AGSPDSIAALTLSLSTLTAEKNRMEEVFQADKKVTREKYENMLASMREETKSLVQQHLAE
VANLKTKIAYEIQEREKERADHAAMLKELHLKLNTERKNKEKLEDKVVQNTESEASQADL
EKRVRDLSGYLEASQRRLMRAEARTAETPALLVRLQQKLALLEQTHAVAIREEQIKAKRA
EESARKICARQEERVALLEGKVAELSQTIGEYDMMRRRDQNTIQQLRESFNGRLLEKIAS
NGSDGTDGDNDETQKSETDNEKLADSEYLQTLIDKIHILKKELLAENEKVGSPVDITTVF
KVDGYDDIHRKCREEYDNLKIEYDNYKFLNVKVTGGDESETEDLKSEIAILKEKVDTYVL
LLEEEKQVKAELLRLHEEVLYA