| New model in OGS2.0 | DPOGS206385 |
|---|---|
| Genomic Position | scaffold1262:- 20881-31454 |
| See gene structure | |
| CDS Length | 3933 |
| Paired RNAseq reads | 182 |
| Single RNAseq reads | 415 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005747 (4e-07) |
| Best Drosophila hit | Dscam3, isoform C (5e-150) |
| Best Human hit | Down syndrome cell adhesion molecule-like protein 1 (1e-78) |
| Best NR hit (blastp) | GF18608 [Drosophila ananassae] (0.0) |
| Best NR hit (blastx) | Dscam3, isoform C [Drosophila melanogaster] (1e-169) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane |
| InterPro families | IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR013783 Immunoglobulin-like fold IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR008957 Fibronectin type III domain IPR013098 Immunoglobulin I-set |
| Orthology group | ND |
Nucleotide sequence:
ATGTTTTCATCGGAACTAACAGAAGGTAGTTCGGTTCAAGTACTTTGCGGAGTTTCTTCT
GGTGATAAACCTGTCTATTTCTCCTGGTTGAAAGATGGTTCTCCTCTCCTCCCCACTTTA
CAGATAGAAGAAAAAAGCCTCAATGACTTTTCCTTGCTAATGTTCCCGGAACTTTCTGCG
CGTCACAGCGGATCTTATACATGTCGCGTTTCCAACCACGCGGCAACAGTCAATTACACC
GCTACGCTCAGCGTGAAAGTTGCTCCTATTTGGGTAACAGAACCATTAGACTCAGCGGTT
CTTTTGGGTGCACCCCTACTACTAGAATGCACTGCAAAAGGACATCCGACTCCCACAGTC
ACATGGTATAGGAGAATCGGGGAAGGAATAAGTGGCATTGAAAATTCTGAACGCTGGGAA
GCCGCCGGTTCAGAGTGGAATGCTGAAAGTAGTGGAATAAGGAACTCCGATGACTTAACC
AGCGCCGTTGACACTAGTGGCCATGGAGGAAAAGGAAGCAGTTCATTGACTGCGCGTTCG
GCAGCACGATCTCATCAAGGTTTATATAGATGCATTGCTGATAACGGTGTTGGACCACCG
TTAGTCAAACATGTCAATGTAACAGTACACGAACCAGCCCACTTCAGTTCTCCGAGTGAT
TCGCTCCGTAACGTGTCGAGTGTTCGCGGTCGTGGCGTCACTCTCAGCTGTCTCGCGCTT
GGTGACGCACCGCTCACAATACATTGGACACATCGCGGCAATAAATTGGACCTTGATTCG
TACAGATGGACGATATCAGAGGTACGCACAAGTGAAGGCGTGCGGTCTTCTCTACAATTA
CGTGCGGCGGAGCGTCGTGATGCTGGCGAGTATAGGTGTCACGCGCGCAACCAATATGGA
CGTGCTGATATACTAATGTTCCTGCAAGTAGAAGAACCACCAGAAGCCCCACGTTCGATT
CAGCTGTGGGGTGCGGGGTCACGATGGGTGCGGGTTCGATGGCTCGCAGCACCATCGTCG
CGAACACACTTTGCTGCGATATGCACCCCTTTGCACTCATTACCAACGCTAAACTCTCTA
CCTTCTTCTGACCATTCCACATATCATTATAACCTTACGCTAGAAGCAACAGATAATAAT
GGGGTTGCCGCTGATGGTTTGCATCTATTAAGTGCAAAATTAGAAGGTTTAAGACCAGCA
GCCGCATATTCTTTACGGGTGGTAGCATCTAATCATGTTGGACAATCACCTCATTCAGAT
GCACTTCTATTTACTACTCTTGAAGAAGCACCGTTAGGACCACCTCAAAATATTCGAGTG
AGACCGATTAATACTGGAGAATTGCATGTGTCGTGGACGGCTCCAGCTCAAGATTCCTGG
AACGGTGAACTATTAGGTTATGCAATTACATGGCGGGAAGTAGGTCGTGTGGAGGGTGGA
AGTAGTGAGGATGGACGAGATGACGGAAGACGGGCTGGTACTACTGTTGCTCGTGGTTGG
AGCACAGTGGAACTGACGGTAGGCGGCCTTAGACAGTTCGCAAGATACGCGCTCTCAGCT
CGAGCATTCAACAGGGCGGGACCCGGGCCTCCATCGACTACTGCCTATGCTACGACTGCC
GATGGTGTTCCGGAAGAACCTCCAAATTCAGTTTCCTGTGAGGCTATATCAGCGAGGTCG
TTGCGTGTTCGATGGTCATCTCCACCACATTCACACACACAAACTATACAGGGTTATGAT
CTTCATTACGCACCTCTACATTTTTCCCAATCGTGGAGTGGTGCGATAGGCTCTGAGGTA
GCTAGAGCTGCTGCTGCTGGAGAGGCAGTCCTCCAGGGTTTGAGGGCGGCTACCAATTAT
TCTGTGTCAGTGCGAGCTAGATCTGACCGGGGCGCGGGTCCGCCCTCCCAACCAGCATAT
TGCCGAACTACTGATGATGTACCCGGTGCTCCGGAACTAATCCGAGCTTTAGCAGCGGGG
CCTGATGCCGTACGCGTATCTTGGATAGCGCCGACCGAACGAGGAGGTTTACTTTCGCAC
TACATGCTATATACGAGGGAACTTGGCAAAGTTGGGGGAGAGTGGTCGCAGCGAGTAGAA
GCCAATGAACAGAGTGAAGGGAATATTGAGGAGGGTGGGGAAGTATGGCATGAAGTACGT
GGGTTGCGTGAACGCGCTGTTTATGAATTTTGGGTACGTGCTTCCACTACTGCTGGCGCT
GGACCGGCCAGTAGAGCTGTTACCGCGGCACCGTCACAATTATTATCAGCAAGAATCTCG
TCACTGGGTCGCTTAGTAACGGCAGCAGTAGGAGCGCGGGTCCGGTTACGTTGTTCAGCA
TTAGGAGTACCACCAATTTCGCGTCGATGGACTCCCCTTCCTCATGCACACACTATCACT
GATACTGGAGATTTGATTATACACAAAGTTGAGCACCACTCGGCTTTGAACTATTCGTGT
TCAGTTCGCAACTCTGCGGGCGGTGACGCGGCGGTATTCGCGTTGCGTGTACTCCGACCA
CCCGCTGCACCTGCACCGCGTCTTGCCCGCGCTGACACTCATGCCTTACATCTTGCATGG
GATCCACCTTTTGATGGCGGTGCATCCATCTTGGGTTACACTGTGTGGTGGTGGCGTGGC
TGGGATAACGGAGGAGGAAAAGGAGAAAAAATTTCAATAGGTGAAATAGATGCAAATGCT
CGCTGGTGGCGCGTGGGTGGGGAGGTGCGAGGTGCGGCGCTTCGTGGGCTCGCTTGCGGC
GCTCCATACTATGTCGCCATGAGAGCACATAACGCGGTCGGCGCTTCAGCGCACTCGAGA
CCGGTCATTCTACACACAAGAGGAGAGAAGGCGAGGGCTCCGACTGGCAAGGAGTGTATA
TGGGCAAACAGCACGGCGTTACGTGTCGCACTTCTTGCATGGGGAGGTCGCTGTGCTGTG
GCCCGCTTCAGTCTGGCCTTGAGAAGAGCCGGCGTTGGAGACGCTTGGATTGATTTGTTG
TCGGATGGAGAAGTTGCCGAAGCAAATAATTTGGAGCCGGGCACTTGGTATGAAATTCGA
GTCTTATCACACTCACCAGCCGGAGACACACCAGCACTTTATAAGGCTGCAACACATACT
ATGAATGGAGAACGTATCGGCGAACCGATAGAATTACCCTTGGAAGCCCGTATGAGTGCA
TCAGACGCGGGAAGTAATATAGGGGGCAGCTCGTCAGGGGCAGTTTGGTGGCGGAACGCC
ATCGGTGCTGCCGCAGTGCTGCTCGGCGTTACATTGCTGACGTTGATTGCCACCGCCACA
CTTATCGCCTGCCGACGCCGCTCCAATCCCTCCACAAACCCTCTACACGATGCTCACACT
CAACCGTTATACGTAGCTCAACCAACTCAAACAAATGGAAAAACAATGACGCCTCCTGAC
GGCAACATGCACGAGATCAGTCCGTACGCGACGTTCAGCATGTCATCTGGAGGCGATGGC
GCTCGCTCGTGTGCACTCCACCTGAGGTCGTTCGCTCGGGACCCACTAGAGCTAGCCGCA
CCACCACCACGACCACATCTGCTGGCTCATCCCAATGATTATGGATGCGTTCGGGACAGT
GATTCAGAGTCGAGCGGCTCACCTTGCGCCGCGTGTGCCGCCGAATTGTACCGACTCCCC
GCAGCTAGGCTTTCAGATACACTACCGGCCGGCAGCGTAGGCGCAGCCGAGTCTAGTACC
GAGGACGGTTCATATGGTGGCGCGCCTCGCCCACGTGAATCCCAACCACGACCGCGTGCA
AGACGACGTGACCATACGAGAGACACTCGTGACACAAGGGACACACGGGACACCCGGGAC
ACACGGGAGGCACGGGACACTCGTGATCCGACACGCCCACATCAACCCACAGTCAGGTAC
TTCCAAGCGACGAGACGACGAGACGGTCTGTGA
Protein sequence:
MFSSELTEGSSVQVLCGVSSGDKPVYFSWLKDGSPLLPTLQIEEKSLNDFSLLMFPELSA
RHSGSYTCRVSNHAATVNYTATLSVKVAPIWVTEPLDSAVLLGAPLLLECTAKGHPTPTV
TWYRRIGEGISGIENSERWEAAGSEWNAESSGIRNSDDLTSAVDTSGHGGKGSSSLTARS
AARSHQGLYRCIADNGVGPPLVKHVNVTVHEPAHFSSPSDSLRNVSSVRGRGVTLSCLAL
GDAPLTIHWTHRGNKLDLDSYRWTISEVRTSEGVRSSLQLRAAERRDAGEYRCHARNQYG
RADILMFLQVEEPPEAPRSIQLWGAGSRWVRVRWLAAPSSRTHFAAICTPLHSLPTLNSL
PSSDHSTYHYNLTLEATDNNGVAADGLHLLSAKLEGLRPAAAYSLRVVASNHVGQSPHSD
ALLFTTLEEAPLGPPQNIRVRPINTGELHVSWTAPAQDSWNGELLGYAITWREVGRVEGG
SSEDGRDDGRRAGTTVARGWSTVELTVGGLRQFARYALSARAFNRAGPGPPSTTAYATTA
DGVPEEPPNSVSCEAISARSLRVRWSSPPHSHTQTIQGYDLHYAPLHFSQSWSGAIGSEV
ARAAAAGEAVLQGLRAATNYSVSVRARSDRGAGPPSQPAYCRTTDDVPGAPELIRALAAG
PDAVRVSWIAPTERGGLLSHYMLYTRELGKVGGEWSQRVEANEQSEGNIEEGGEVWHEVR
GLRERAVYEFWVRASTTAGAGPASRAVTAAPSQLLSARISSLGRLVTAAVGARVRLRCSA
LGVPPISRRWTPLPHAHTITDTGDLIIHKVEHHSALNYSCSVRNSAGGDAAVFALRVLRP
PAAPAPRLARADTHALHLAWDPPFDGGASILGYTVWWWRGWDNGGGKGEKISIGEIDANA
RWWRVGGEVRGAALRGLACGAPYYVAMRAHNAVGASAHSRPVILHTRGEKARAPTGKECI
WANSTALRVALLAWGGRCAVARFSLALRRAGVGDAWIDLLSDGEVAEANNLEPGTWYEIR
VLSHSPAGDTPALYKAATHTMNGERIGEPIELPLEARMSASDAGSNIGGSSSGAVWWRNA
IGAAAVLLGVTLLTLIATATLIACRRRSNPSTNPLHDAHTQPLYVAQPTQTNGKTMTPPD
GNMHEISPYATFSMSSGGDGARSCALHLRSFARDPLELAAPPPRPHLLAHPNDYGCVRDS
DSESSGSPCAACAAELYRLPAARLSDTLPAGSVGAAESSTEDGSYGGAPRPRESQPRPRA
RRRDHTRDTRDTRDTRDTRDTREARDTRDPTRPHQPTVRYFQATRRRDGL