| New model in OGS2.0 | DPOGS204352 |
|---|---|
| Genomic Position | scaffold1293:- 18816-20363 |
| See gene structure | |
| CDS Length | 1548 |
| Paired RNAseq reads | 86 |
| Single RNAseq reads | 216 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007055 (1e-156) |
| Best Drosophila hit | CG6053 (6e-87) |
| Best Human hit | dynein intermediate chain 2, axonemal isoform 1 (2e-77) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP011539-PA [Tribolium castaneum] (1e-100) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP011539-PA [Tribolium castaneum] (1e-94) |
| GeneOntology terms | GO:0005868 cytoplasmic dynein complex GO:0003774 motor activity GO:0005875 microtubule associated complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL40124 |
Nucleotide sequence:
ATGAATACTATACGTGTTACTCTACAAGACCGTGGAGTTAACCATGCAGAAGGCGGGTGG
CCAAAAGATGTTAATGTTAATGACGAGGAAGCGACAGCCCGATATCGTAGACGTTTTGAA
CGAGATGATGCATATGTGGGTGCTGTACTTTCTTCAAATCCTTATTTCGAACACTTAATT
CATCAAAATAATGCTATTGAAATGTACAATATGTATTTCAAGGAAATGAAGCCCCAGAAA
CCAGTGGAAACATATTCAGTGAAAATAAAAAATGCTTATAAAGATTTATTTCAGCGTCCC
GTTGCTTCAATTGCTTGGACCTTCGAGGCTAATTCTAAACTTGTTGTCTCCCATTGTTAT
AAAAAAATGCTTTTAGGTAAACCACTTAACACAAGACTAGAGGGCAATGTTTGGGATTTA
GAAAATGCGAATGAACCAGCGGAACAATTTTTGTCTCCAACAGCATGTTGGCAAATAGTT
TGTTCACCTTCTCATCCCAAAGTAATGATGGGTGGCCTCGAAGATGGCAGAGTATGTATT
TTTGATTTGCGTGAAAAAATAGAACCAGTTCGGTTCAGCATGATGCATTTAGCCCATAGA
GATCCCGTTAGTGCACTATTATTCTTACATAGCAGACTTAATACTGAATTCTTTAGTGGT
TCTAGCGATGGAAAATGTATGTGGTGGGATATAAGAAATATATCTGAGCCTGTCGATTCA
CTTATTATGTCGATAAATCCGACTTCTCAAGATTTTGTATCTATGGCTGATGCAGAAGGT
ATAAGTTGTTTGCAATATGATAAAACTTTCCCAACCAAATTTTTGTGTGGTACTGACACA
GGTTTAGTTATTAATGTGAATCGTAAAGGCAAAACTCATCAAGAAATTATGAGTGCCATT
TTCAATGCTCATTATGGTCCAGTAAAAGCCCTTTATCGTAGTCCTTGCACGACAAAAGTT
TTTATTACATGTGGCGACTGGACCGTTAATATTTGGAGTGATGATGTGCATTGCTCCCCT
ATAATATGTGGTAAAGCACATAGAATGCAAATATCTGACGTTAGTTGGTCTCCTCAAAAA
ATGTCAGGATACATGTCTATAAGTTATGATGGAAAATTTAGGTACTGGGATCTATTAAGA
CGACACTATGGTGCTATTGTCACAAAACCGGTTTCAAAATTTCCGCTTTTAAGACTGAAA
CCAAACAAACAGGGTAAATTTGTTGCCGTTGGAGACACACAAGGAATTGTGAATCTTTTA
TCGTTATCTGATAGTCTTGTTATTTCGGATAATAAAGATAAGACTTTAATGAACCAAACA
TTCGAACGTGAAGGGCGAAGGGAACATATAATAGAAACAAGAATAAAAGAAATAAGATTA
AAATTGAGAGAAGTTGAAACGGGAGTAGATTCTGATATTGATTTAATGGATGAAAATGTT
ATAAAAACCGCAGAAGATGAATTTAAGAGAGTGGTTACTGAGGAATTGAAAAGATCTGGT
ACAACACACATTTCTAGCGGAAAACGTTATCCAATGCGAAACCGTTAA
Protein sequence:
MNTIRVTLQDRGVNHAEGGWPKDVNVNDEEATARYRRRFERDDAYVGAVLSSNPYFEHLI
HQNNAIEMYNMYFKEMKPQKPVETYSVKIKNAYKDLFQRPVASIAWTFEANSKLVVSHCY
KKMLLGKPLNTRLEGNVWDLENANEPAEQFLSPTACWQIVCSPSHPKVMMGGLEDGRVCI
FDLREKIEPVRFSMMHLAHRDPVSALLFLHSRLNTEFFSGSSDGKCMWWDIRNISEPVDS
LIMSINPTSQDFVSMADAEGISCLQYDKTFPTKFLCGTDTGLVINVNRKGKTHQEIMSAI
FNAHYGPVKALYRSPCTTKVFITCGDWTVNIWSDDVHCSPIICGKAHRMQISDVSWSPQK
MSGYMSISYDGKFRYWDLLRRHYGAIVTKPVSKFPLLRLKPNKQGKFVAVGDTQGIVNLL
SLSDSLVISDNKDKTLMNQTFEREGRREHIIETRIKEIRLKLREVETGVDSDIDLMDENV
IKTAEDEFKRVVTEELKRSGTTHISSGKRYPMRNR